RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FCARP24071 287 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ART1P52961 327 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ARPC4P59998 168 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 FAM189A2Q15884 450 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 NXNL2Q5VZ03 156 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 BORAQ6PGQ7 559 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 CNIH2Q6PI25 160 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 LRRN1Q6UXK5 716 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 NT5CQ8TCD5 201 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 WDR34Q96EX3 536 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 OR11A1Q9GZK7 315 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 OR51B6Q9H340 312 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 EVA1AQ9H8M9 152 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 SYNPO2LQ9H987 977 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF639Q9UID6 485 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 MCTS1Q9ULC4 181 aaKnown RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 NDRG4Q9ULP0 352 aaKnown RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 TRAV18A0A075B6X5 111 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 A0A087WV62 115 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ZC3H12DA2A288 527 aaKnown RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ACOD1A6NK06 481 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF593O00488 134 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ICOSLGO75144 302 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 IGHA2P01877 340 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 FOLR1P15328 257 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 LIPAP38571 399 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 NXPH1P58417 271 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 UBE2NP61088 152 aaKnown RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 COL28A1Q2UY09 1125 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 SYT14P1Q58G82 188 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 SFRP4Q6FHJ7 346 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 FAM199XQ6PEV8 388 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 DHRS4L2Q6PKH6 230 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ABHD12BQ7Z5M8 362 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 CAMKMTQ7Z624 323 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 LRRC56Q8IYG6 542 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 CRIPAKQ8N1N5 446 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 OR5T2Q8NGG2 359 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 HOXB13Q92826 284 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 UTP23Q9BRU9 249 aaKnown RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 TP63Q9H3D4 680 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 ANKRD19PQ9H560 264 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 MED17Q9NVC6 651 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 SH3BGRL2Q9UJC5 107 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 BOKQ9UMX3 212 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 RASD1Q9Y272 281 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 NOP16Q9Y3C1 178 aaKnown RBP6.7□□□□□ -1.34
CSDE1-218ENST00000610726 SBF1O95248 1867 aa6.7□□□□□ -1.34
CSDE1-218ENST00000610726 A0A1W2PS29 197 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 PRAMEF25A6NGN4 478 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 A8MVM7 634 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 GATBO75879 557 aaKnown RBP6.69□□□□□ -1.34
CSDE1-218ENST00000610726 APOC1P02654 83 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 ERCC1P07992 297 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-218ENST00000610726 TMEM225BP0DP42 221 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 BIDP55957 195 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CLDN17P56750 224 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 SLC35A2P78381 396 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 MRPL49Q13405 166 aaKnown RBP6.69□□□□□ -1.34
CSDE1-218ENST00000610726 RAB11BQ15907 218 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 SPIN3Q5JUX0 258 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 FAM69AQ5T7M9 428 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CDH24Q86UP0 819 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 FNDC8Q8TC99 324 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CCDC107Q8WV48 283 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 ACOT12Q8WYK0 555 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CPNE2Q96FN4 548 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CITED4Q96RK1 184 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 BCL7BQ9BQE9 202 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 RHNO1Q9BSD3 238 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 URM1Q9BTM9 101 aaKnown RBP6.69□□□□□ -1.34
CSDE1-218ENST00000610726 EMC6Q9BV81 110 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 FANCFQ9NPI8 374 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 HINT3Q9NQE9 182 aaKnown RBP6.69□□□□□ -1.34
CSDE1-218ENST00000610726 SCP2D1Q9UJQ7 156 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CCL27Q9Y4X3 112 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 RTTNQ86VV8 2226 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 ICE1Q9Y2F5 2266 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 ACACAQ13085 2346 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 SHISA7A6NL88 538 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 LRRTM2O43300 516 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 NCR1O76036 304 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 SMIM18P0DKX4 95 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CDK4P11802 303 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 DRD5P21918 477 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 SLC2A5P22732 501 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 PCSK6P29122 969 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 GPR3P46089 330 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 RPS25P62851 125 aaKnown RBP6.69□□□□□ -1.34
CSDE1-218ENST00000610726 AKIRIN2Q53H80 203 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 C1orf140Q5VVS0 124 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 FCRL6Q6DN72 434 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF425Q6IV72 752 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 LACC1Q8IV20 430 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF584Q8IVC4 421 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 LINC00346Q8IVM7 164 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 MISPQ8IVT2 679 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CMIPQ8IY22 773 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 LRRC18Q8N456 261 aa6.69□□□□□ -1.34
CSDE1-218ENST00000610726 CNEP1R1Q8N9A8 125 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms