RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 LINC00052Q96N35 136 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 NRIP3Q9NQ35 241 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 PCOLCE2Q9UKZ9 415 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 ICAM5Q9UMF0 924 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 A0A0B4J203 849 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 A0A1W2PPK0 400 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 A8MXK9 166 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 CYR61O00622 381 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 GPR171O14626 319 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 NKX2-2O95096 273 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 CCR6P51684 374 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 KIAA1024LP59773 190 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 LGALS3BPQ08380 585 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 FHL1Q13642 323 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 GGTLC2Q14390 218 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 EXOSC7Q15024 291 aaKnown RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 PRRT3Q5FWE3 981 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 UBE2NLQ5JXB2 153 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 CFAP77Q6ZQR2 320 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 OR51Q1Q8NH59 317 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 CEP76Q8TAP6 659 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF671Q8TAW3 534 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 SNX33Q8WV41 574 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 SMIM4Q8WVI0 70 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 OR1E3Q8WZA6 343 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 RSC1A1Q92681 617 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 RERGQ96A58 199 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 ZMYND19Q96E35 227 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF416Q9BWM5 594 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 TWSG1Q9GZX9 223 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 DLL4Q9NR61 685 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 CHRNA9Q9UGM1 479 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 GMEB2Q9UKD1 530 aa13.48□□□□□ -0.25
CTCFL-219ENST00000608720 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
CTCFL-219ENST00000608720 TRBV23OR9-2A0A075B6M9 112 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 M0R233 179 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF749O43361 778 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ITGA10O75578 1167 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 TFP02787 698 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ANKRD34CP0C6C1 535 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 HCCSP53701 268 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ADPRHP54922 357 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 RPS11P62280 158 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ST3GAL2Q16842 350 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 UNQ9370/PRO34162Q6UXP9 181 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 SLC35F2Q8IXU6 374 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 TMEFF1Q8IYR6 380 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 RIT1Q92963 219 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 CTHRC1Q96CG8 243 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ZFYVE21Q9BQ24 234 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF436Q9C0F3 470 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 SFXN1Q9H9B4 322 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 PCDHB16Q9NRJ7 776 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ACTR10Q9NZ32 417 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 AKAP7Q9P0M2 348 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 PCDHGA9Q9Y5G4 932 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 COL6A3P12111 3177 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 REV3LO60673 3130 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 SPTBN5Q9NRC6 3674 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 GOLGA4Q13439 2230 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 TRBV2A0A0J9YWF9 115 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF879B4DU55 563 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 H0YGG7 62 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ABCD4O14678 606 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 NDUFB2O95178 105 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 CFDP00746 253 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 MT-ND4P03905 459 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 HIST1H1CP16403 213 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 TYRP1P17643 537 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ACAA2P42765 397 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ARF3P61204 181 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 DHODHQ02127 395 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 CRYZQ08257 329 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 PON3Q15166 354 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 TCEA2Q15560 299 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ALG10BQ5I7T1 473 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 FAM69AQ5T7M9 428 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ZAR1Q86SH2 424 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 SYT9Q86SS6 491 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 ARL14Q8N4G2 192 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 TMEM52Q8NDY8 209 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 OR5T2Q8NGG2 359 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 OR4K13Q8NH42 304 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 OR14A16Q8NHC5 309 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 DACT3Q96B18 629 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 PTCHD1Q96NR3 888 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 CD93Q9NPY3 652 aa13.47□□□□□ -0.25
CTCFL-219ENST00000608720 MRPS2Q9Y399 296 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 AK6Q9Y3D8 172 aaKnown RBP13.47□□□□□ -0.25
CTCFL-219ENST00000608720 A0A0C4DFX4 3053 aa13.46□□□□□ -0.25
CTCFL-219ENST00000608720 VCANP13611 3396 aa13.46□□□□□ -0.25
CTCFL-219ENST00000608720 POM121BA6NF01 834 aa13.46□□□□□ -0.25
CTCFL-219ENST00000608720 ZNF593O00488 134 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms