RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 REG3AQ06141 175 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 RSPO1Q2MKA7 263 aaPredicted RBP2.32□□□□□ -2.04
HDDC2-207ENST00000608532 SAMD4BQ5PRF9 694 aaKnown RBP2.32□□□□□ -2.04
HDDC2-207ENST00000608532 LY6G6FQ5SQ64 297 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 KCNIP4Q6PIL6 250 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 SLC25A34Q6PIV7 304 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 OR10A7Q8NGE5 316 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 OR4D9Q8NGE8 314 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 UBALD1Q8TB05 177 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 MCOLN3Q8TDD5 553 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 SEC22AQ96IW7 307 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 ALG12Q9BV10 488 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 MRPL13Q9BYD1 178 aaKnown RBP2.32□□□□□ -2.04
HDDC2-207ENST00000608532 ZNF226Q9NYT6 803 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 TBK1Q9UHD2 729 aa2.32□□□□□ -2.04
HDDC2-207ENST00000608532 IGLV11-55A0A075B6I3 123 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 NSG1A0A0A6YYJ2 146 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 B4GALT5O43286 388 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 CXCL13O43927 109 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 N4BP1O75113 896 aaKnown RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 SEC22BO75396 215 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 KLK3P07288 261 aaPredicted RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 ZNF14P17017 642 aaPredicted RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 BTCP35070 178 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 PARP15Q460N3 678 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 TP53I3Q53FA7 332 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 KPRPQ5T749 579 aaPredicted RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 ZNF836Q6ZNA1 936 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 LRRC43Q8N309 656 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 Q8N976 141 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 HTR3CQ8WXA8 447 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 CCDC47Q96A33 483 aaKnown RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 ASB9Q96DX5 294 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 CMTM7Q96FZ5 175 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 LINC00477Q96M19 166 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 ZNF2Q9BSG1 426 aaPredicted RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 ACTR6Q9GZN1 396 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 HSD3B7Q9H2F3 369 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 RNF167Q9H6Y7 350 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 SLC17A5Q9NRA2 495 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 SIGLEC8Q9NYZ4 499 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 PCYOX1Q9UHG3 505 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 OPN4Q9UHM6 478 aa2.31□□□□□ -2.04
HDDC2-207ENST00000608532 AK6Q9Y3D8 172 aaKnown RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 YTHDF2Q9Y5A9 579 aaKnown RBP2.31□□□□□ -2.04
HDDC2-207ENST00000608532 IGLV2-18A0A075B6J9 118 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 RBMY1BA6NDE4 496 aaKnown RBP2.3□□□□□ -2.04
HDDC2-207ENST00000608532 RBMY1EA6NEQ0 496 aaKnown RBP2.3□□□□□ -2.04
HDDC2-207ENST00000608532 UGT1A9O60656 530 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 RBBP9O75884 186 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 OPN1MWP04001 364 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 RBMY1DP0C7P1 496 aaKnown RBP2.3□□□□□ -2.04
HDDC2-207ENST00000608532 RBMY1A1P0DJD3 496 aaKnown RBP2.3□□□□□ -2.04
HDDC2-207ENST00000608532 OPN1MW2P0DN77 364 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 OPN1MW3P0DN78 364 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 CCND2P30279 289 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 UBE2AP49459 152 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 PKNOX1P55347 436 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 PJVKQ0ZLH3 352 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 SNTB2Q13425 540 aaKnown RBP2.3□□□□□ -2.04
HDDC2-207ENST00000608532 KIAA0087Q14695 138 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 GGTA1PQ4G0N0 100 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 MARCH8Q5T0T0 291 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 TPGS2Q68CL5 300 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 CLDN19Q8N6F1 224 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 OR10G9Q8NGN4 311 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 BMFQ96LC9 184 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 ZNF641Q96N77 438 aaPredicted RBP2.3□□□□□ -2.04
HDDC2-207ENST00000608532 NPAS2Q99743 824 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 ZNF670Q9BS34 389 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 KRT23Q9C075 422 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 DPH5Q9H2P9 285 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 DBNDD1Q9H9R9 158 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 ZFP14Q9HCL3 533 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 INPP5EQ9NRR6 644 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 QPCTLQ9NXS2 382 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 HOXC10Q9NYD6 342 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 COPS3Q9UNS2 423 aa2.3□□□□□ -2.04
HDDC2-207ENST00000608532 COLCA2A8K830 154 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 OR1F1O43749 312 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 CD5LO43866 347 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 ENTPD5O75356 428 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 C6orf47O95873 294 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 HPGDP15428 266 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 GAP43P17677 238 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 CNR1P21554 472 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 GPM6AP51674 278 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 RPS14P62263 151 aaKnown RBP2.29□□□□□ -2.04
HDDC2-207ENST00000608532 ENPEPQ07075 957 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 SMARCB1Q12824 385 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 NANOGP8Q6NSW7 305 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 FAM71F2Q6NXP2 309 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 PLBD1Q6P4A8 553 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 BLOC1S2Q6QNY1 142 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 TICAM2Q86XR7 235 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 OR4F15Q8NGB8 312 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 EXOSC8Q96B26 276 aaKnown RBP2.29□□□□□ -2.04
HDDC2-207ENST00000608532 RIT2Q99578 217 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 NDFIP1Q9BT67 221 aa2.29□□□□□ -2.04
HDDC2-207ENST00000608532 EDEM2Q9BV94 578 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms