RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 OTUD3Q5T2D3 398 aaPredicted RBP12.72□□□□□ -0.37
CTSA-219ENST00000607841 LCN8Q6JVE9 175 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 CYP2R1Q6VVX0 501 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 CCDC121Q6ZUS5 278 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 SLC25A36Q96CQ1 311 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 CCDC124Q96CT7 223 aaKnown RBP12.72□□□□□ -0.37
CTSA-219ENST00000607841 STARD4Q96DR4 205 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 CLPTM1LQ96KA5 538 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 PSD2Q9BQI7 771 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 PTDSS2Q9BVG9 487 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 KLHL4Q9C0H6 718 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 MMADHCQ9H3L0 296 aaPredicted RBP12.72□□□□□ -0.37
CTSA-219ENST00000607841 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 C6orf203Q9P0P8 240 aaPredicted RBP12.72□□□□□ -0.37
CTSA-219ENST00000607841 FOXD3Q9UJU5 478 aaPredicted RBP12.72□□□□□ -0.37
CTSA-219ENST00000607841 CLEC4AQ9UMR7 237 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 A4GNTQ9UNA3 340 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 PROCRQ9UNN8 238 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 CORINQ9Y5Q5 1042 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 ENPP4Q9Y6X5 453 aa12.72□□□□□ -0.37
CTSA-219ENST00000607841 HIVEP3Q5T1R4 2406 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 HTR3EA5X5Y0 456 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 NKX2-6A6NCS4 301 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 AQP7P3A6NL99 342 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 CYSRT1A8MQ03 144 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 ZNF724A8MTY0 619 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 FTCDNL1E5RQL4 147 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 MSTNO14793 375 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 GSC2O15499 205 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
CTSA-219ENST00000607841 AKR7A3O95154 331 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 LYPD3O95274 346 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 CLDN1O95832 211 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 MT-ATP6P00846 226 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 CD8BP10966 210 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 RHCEP18577 417 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 AGTR1P30556 359 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 YAP1P46937 504 aaKnown RBP12.71□□□□□ -0.37
CTSA-219ENST00000607841 TRAM2Q15035 370 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 TMEM225Q6GV28 225 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 ABLIM2Q6H8Q1 611 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 PGM2L1Q6PCE3 622 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 STK32CQ86UX6 486 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 TSPYL5Q86VY4 417 aaPredicted RBP12.71□□□□□ -0.37
CTSA-219ENST00000607841 P3H2Q8IVL5 708 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 TUSC5Q8IXB3 177 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 OFCC1Q8IZS5 231 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 C10orf53Q8N6V4 93 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 RELL2Q8NC24 303 aaPredicted RBP12.71□□□□□ -0.37
CTSA-219ENST00000607841 TMEM239Q8WW34 195 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 TAAR8Q969N4 342 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 PRSS27Q9BQR3 290 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 ZNF426Q9BUY5 554 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 SF3B5Q9BWJ5 86 aaKnown RBP12.71□□□□□ -0.37
CTSA-219ENST00000607841 ASPNQ9BXN1 380 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 FANCFQ9NPI8 374 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 PLSCR4Q9NRQ2 329 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 RASD1Q9Y272 281 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 B3GALT5Q9Y2C3 310 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 V9GYQ6 96 aa12.71□□□□□ -0.37
CTSA-219ENST00000607841 MYO7BQ6PIF6 2116 aa12.71□□□□□ -0.38
CTSA-219ENST00000607841 COL12A1Q99715 3063 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 IGKV3D-15A0A087WSY6 115 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 ATP6V1B2P21281 511 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 SLC16A1P53985 500 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 MS4A2Q01362 244 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 FBXL19-AS1Q494R0 122 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 VWA1Q6PCB0 445 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 WDR88Q6ZMY6 472 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 BTLAQ7Z6A9 289 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 GALNT5Q7Z7M9 940 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 LUZP2Q86TE4 346 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 NKAIN4Q8IVV8 208 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 CCDC103Q8IW40 242 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 FAM86B1Q8N7N1 296 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 TMEM99Q8N816 258 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 SCAIQ8N9R8 606 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 C7orf34Q96L11 122 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 ZNF300Q96RE9 604 aaPredicted RBP12.7□□□□□ -0.38
CTSA-219ENST00000607841 CADM1Q9BY67 442 aaKnown RBP12.7□□□□□ -0.38
CTSA-219ENST00000607841 ANKRD19PQ9H560 264 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 IL1RAPQ9NPH3 570 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 NDUFAF4Q9P032 175 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 JKAMPQ9P055 326 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 PLEKHB1Q9UF11 243 aaPredicted RBP12.7□□□□□ -0.38
CTSA-219ENST00000607841 MED31Q9Y3C7 131 aa12.7□□□□□ -0.38
CTSA-219ENST00000607841 PHF3Q92576 2039 aaKnown RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 AQP12BA6NM10 295 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 ZNF716A6NP11 495 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 A8MXE2 369 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 J3KTA2 159 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 hCG_2039718K7EN88 272 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 KPNA4O00629 521 aaPredicted RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 ACOT8O14734 319 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 FZD7O75084 574 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 CGAP01215 116 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 IGF2P01344 180 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 MT-ND1P03886 318 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 SEMG1P04279 462 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 FABP3P05413 133 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms