RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 POPDC2Q9HBU9 364 aa4.02□□□□□ -1.77
LINC00397-202ENST00000606785 MRM3Q9HC36 420 aaKnown RBP4.02□□□□□ -1.77
LINC00397-202ENST00000606785 NANSQ9NR45 359 aa4.02□□□□□ -1.77
LINC00397-202ENST00000606785 ARMCX1Q9P291 453 aa4.02□□□□□ -1.77
LINC00397-202ENST00000606785 PISDQ9UG56 409 aa4.02□□□□□ -1.77
LINC00397-202ENST00000606785 TMCO1Q9UM00 188 aa4.02□□□□□ -1.77
LINC00397-202ENST00000606785 PPIAL4AQ9Y536 164 aa4.02□□□□□ -1.77
LINC00397-202ENST00000606785 TCF20Q9UGU0 1960 aaKnown RBP4.02□□□□□ -1.77
LINC00397-202ENST00000606785 TDRD15B5MCY1 1934 aaKnown RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 LOC100131303A0A0U1RQF7 123 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 A0A1W2PPE3 182 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CCT8L1PA6NM43 557 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 EFCAB7A8K855 629 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SHISA9B4DS77 424 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 E9PAM4 449 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 DNALI1O14645 258 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 KMOO15229 486 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 RAD51BO15315 384 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 PRKYO43930 277 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CACNG3O60359 315 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SCRG1O75711 98 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 ATP5LO75964 103 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 KBTBD11O94819 623 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 GLAP06280 429 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 PABPC4LP0CB38 370 aaKnown RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CALM1P0DP23 149 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CALM2P0DP24 149 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CALM3P0DP25 149 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 LAMP1P11279 417 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 HOXB6P17509 224 aaKnown RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 PRKACAP17612 351 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 GNA11P29992 359 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 NMT1P30419 496 aaKnown RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 FGF9P31371 208 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 NUP62P37198 522 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 HLCSP50747 726 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 PRKXP51817 358 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CRYBB1P53674 252 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 HMGCS2P54868 508 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 ERVPABLB-1P60509 514 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 BST2Q10589 180 aaKnown RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 DMC1Q14565 340 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 RGS21Q2M5E4 152 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 TRIM16LQ309B1 348 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 OTUD3Q5T2D3 398 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CARD17Q5XLA6 110 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 ADAM5Q6NVV9 412 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 USP50Q70EL3 339 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 UTS2BQ765I0 119 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SLC51BQ86UW2 128 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SLC47A2Q86VL8 602 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 C9orf40Q8IXQ3 194 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 LRRC34Q8IZ02 419 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 OR2L13Q8N349 312 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 C17orf47Q8NEP4 570 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SPATA4Q8NEY3 305 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CLHC1Q8NHS4 586 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 VN1R17PQ8TDU5 208 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 TMA16Q96EY4 203 aaKnown RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 TSNARE1Q96NA8 513 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 MCCC1Q96RQ3 725 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 IL4I1Q96RQ9 567 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 ELOVL4Q9GZR5 314 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SLITRK2Q9H156 845 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 ZSCAN16Q9H4T2 348 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 CAB39LQ9H9S4 337 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SPACA1Q9HBV2 294 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 PAQR5Q9NXK6 330 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-202ENST00000606785 SLC7A8Q9UHI5 535 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 PHF11Q9UIL8 331 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 RIMS3Q9UJD0 308 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 ERVW-1Q9UQF0 538 aa4.01□□□□□ -1.77
LINC00397-202ENST00000606785 ERICH2A1L162 156 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 TRDCB7Z8K6 153 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 E7ESA3 106 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 SAP18O00422 153 aaKnown RBP4□□□□□ -1.77
LINC00397-202ENST00000606785 RGS16O15492 202 aaPredicted RBP4□□□□□ -1.77
LINC00397-202ENST00000606785 OR10H3O60404 316 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 PFKFB2O60825 505 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 SH3BGRLO75368 114 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 NOL4O94818 638 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 VENTXO95231 258 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 CRYGBP07316 175 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 FGF4P08620 206 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 RNF224P0DH78 156 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 ATP1B2P14415 290 aaPredicted RBP4□□□□□ -1.77
LINC00397-202ENST00000606785 IGHV1-2P23083 117 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 ALDH3A1P30838 453 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 CASP14P31944 242 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 ELK3P41970 407 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 GYG1P46976 350 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 QARSP47897 775 aaKnown RBP4□□□□□ -1.77
LINC00397-202ENST00000606785 DAP3P51398 398 aaKnown RBP4□□□□□ -1.77
LINC00397-202ENST00000606785 ENPEPQ07075 957 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 TGM3Q08188 693 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 GK3PQ14409 553 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 ARHGAP19Q14CB8 494 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 HSP90AA4PQ58FG1 418 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 DMRTC1Q5HYR2 192 aa4□□□□□ -1.77
LINC00397-202ENST00000606785 CEP85LQ5SZL2 805 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms