RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ELOVL3Q9HB03 270 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 TMEM269A0A1B0GVZ9 245 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 HOXC8P31273 242 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 RAB6CQ53S08 254 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 FAM57BQ71RH2 274 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 SORBS1Q9BX66 1292 aaKnown RBP8.98□□□□□ -0.97
CSMD1-217ENST00000602723 RAB6CQ9H0N0 254 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 CLMPQ9H6B4 373 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 SAGE1Q9NXZ1 904 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 OR14J1Q9UGF5 321 aa8.98□□□□□ -0.97
CSMD1-217ENST00000602723 ANKRD34BA5PLL1 514 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 MAGEB4O15481 346 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 GPR39O43194 453 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF140P52738 457 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ENTPD8Q5MY95 495 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 LIPIQ6XZB0 460 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 OR1E3Q8WZA6 343 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 NKX3-1Q99801 234 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 OR52A5Q9H2C5 316 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 HIPK2Q9H2X6 1198 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 TUBGCP6Q96RT7 1819 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 PFKMP08237 780 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ETV6P41212 452 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 EEF1A1P68104 462 aaKnown RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 EXOSC7Q15024 291 aaKnown RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 OR1Q1Q15612 314 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ACOT4Q8N9L9 421 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 GALNT9Q9HCQ5 603 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 NRIP3Q9NQ35 241 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 PCDHGA5Q9Y5G8 931 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 FOCADQ5VW36 1801 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 FREM3P0C091 2139 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 COL1A1P02452 1464 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 PPP1R2P9O14990 202 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ATP1B3P54709 279 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF705AQ6ZN79 300 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ACVR1CQ8NER5 493 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 OR56B1Q8NGI3 324 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 POFUT1Q9H488 388 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 CTDSP2O14595 271 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 IVDP26440 423 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 AKR1C1Q04828 323 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 DBPQ10586 325 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 NANPQ8TBE9 248 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 OR52D1Q9H346 318 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 NTN4Q9HB63 628 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 FAM183AA6NL82 134 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 A8MVM7 634 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 SEMA4FO95754 770 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF44P15621 663 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ITGB7P26010 798 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 C1orf61Q13536 156 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 RNLSQ5VYX0 342 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 MED20Q9H944 212 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 SLC6A20Q9NP91 592 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 RBFOX1Q9NWB1 397 aaKnown RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 DOCK2Q92608 1830 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 LRIT2A6NDA9 550 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ARHGAP33O14559 1287 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 POU3F2P20265 443 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 PTGER4P35408 488 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 FOLR3P41439 243 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 SELPLGQ14242 412 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 C3orf38Q5JPI3 329 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 SHEQ5VZ18 495 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 STEAP3Q658P3 488 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 RANBP10Q6VN20 620 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 KHSRPQ92945 711 aaKnown RBP eCLIP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 RAB39BQ96DA2 213 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ADOQ96SZ5 270 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 CRB3Q9BUF7 120 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ANKRD19PQ9H560 264 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 SPO11Q9Y5K1 396 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 MYLKQ15746 1914 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 A0A0J9YY10 115 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 CBX7O95931 251 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 LRRC56Q8IYG6 542 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 CHST14Q8NCH0 376 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 NPIPB15A6NHN6 443 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 C17orf112F2Z3M2 114 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 HNRNPA1P09651 372 aaKnown RBP eCLIP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 VIPR2P41587 438 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 FABP6P51161 128 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 TSSK2Q96PF2 358 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 UBL7Q96S82 380 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 HEPACAM2A8MVW5 462 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 DDAH2O95865 285 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 FOLR1P15328 257 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 PRDX3P30048 256 aaKnown RBP8.97□□□□□ -0.97
CSMD1-217ENST00000602723 SLC5A2P31639 672 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 LIN7BQ9HAP6 207 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 ETV7Q9Y603 341 aa8.97□□□□□ -0.97
CSMD1-217ENST00000602723 YLPM1P49750 1951 aaKnown RBP8.96□□□□□ -0.97
CSMD1-217ENST00000602723 CACNA1EQ15878 2313 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 ICMTO60725 284 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 LDB3O75112 727 aa8.96□□□□□ -0.97
CSMD1-217ENST00000602723 PSMB1P20618 241 aaKnown RBP8.96□□□□□ -0.97
CSMD1-217ENST00000602723 SOX4Q06945 474 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-217ENST00000602723 OR7E24Q6IFN5 339 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms