RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TOMM20Q15388 145 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 OCLNQ16625 522 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 GLYR1Q49A26 553 aaPredicted RBP16.26■□□□□ 0.19
VRK3-225ENST00000601912 TMEM201Q5SNT2 666 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 SLC25A30Q5SVS4 291 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 DPY19L2P2Q6ZN68 376 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 ZNF540Q8NDQ6 660 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 SNIP1Q8TAD8 396 aaKnown RBP16.26■□□□□ 0.19
VRK3-225ENST00000601912 IPCEF1Q8WWN9 437 aaPredicted RBP16.26■□□□□ 0.19
VRK3-225ENST00000601912 HAS2Q92819 552 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 ASPNQ9BXN1 380 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 CCNB1IP1Q9NPC3 277 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 RPH3AQ9Y2J0 694 aaPredicted RBP16.26■□□□□ 0.19
VRK3-225ENST00000601912 KLF13Q9Y2Y9 288 aaPredicted RBP16.26■□□□□ 0.19
VRK3-225ENST00000601912 FREM2Q5SZK8 3169 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 SPTBN2O15020 2390 aa16.26■□□□□ 0.19
VRK3-225ENST00000601912 SNTNA6NMZ2 147 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 PPP1R3DO95685 299 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 PEPDP12955 493 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 CD46P15529 392 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 FOXK2Q01167 660 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 APOFQ13790 326 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 SYT14P1Q58G82 188 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 RAET1LQ5VY80 246 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 OR2M7Q8NG81 312 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 OR5M1Q8NGP8 315 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 MFSD8Q8NHS3 518 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 LRR1Q96L50 414 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 C5orf34Q96MH7 638 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 PIGQQ9BRB3 760 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 TAPBPLQ9BX59 468 aa16.25■□□□□ 0.19
VRK3-225ENST00000601912 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.25■□□□□ 0.19
VRK3-225ENST00000601912 H3BML4 177 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 EFSO43281 561 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 EFNA2O43921 213 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ZIC3O60481 467 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ENTPD6O75354 484 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SP1P08047 785 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ZNF17P17021 662 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 GTF2E2P29084 291 aaKnown RBP16.24■□□□□ 0.19
VRK3-225ENST00000601912 IDUAP35475 653 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 AQP2P41181 271 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 CLK1P49759 484 aaKnown RBP16.24■□□□□ 0.19
VRK3-225ENST00000601912 MLLT10P55197 1068 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ALG10Q5BKT4 473 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SLC25A25Q6KCM7 469 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ARHGAP11AQ6P4F7 1023 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ZNF773Q6PK81 442 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 MDS2Q8NDY4 140 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 FDCSPQ8NFU4 85 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 OR5J2Q8NH18 312 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ERMAPQ96PL5 475 aaPredicted RBP16.24■□□□□ 0.19
VRK3-225ENST00000601912 GPX7Q96SL4 187 aaPredicted RBP16.24■□□□□ 0.19
VRK3-225ENST00000601912 B4GALT7Q9UBV7 327 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 MRPS18CQ9Y3D5 142 aaKnown RBP16.24■□□□□ 0.19
VRK3-225ENST00000601912 CORINQ9Y5Q5 1042 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 LRRC3CA6NJW4 275 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 RIIAD1A6NNX1 92 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 MCIDASD6RGH6 385 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 KLRC4-KLRK1H3BQV0 150 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 IDH3BO43837 385 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 OR6A2O95222 327 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 IFNGP01579 166 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 IL11P20809 199 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 UQCRC1P31930 480 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SLC35A2P78381 396 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SGCBQ16585 318 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 TMEM44Q2T9K0 475 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 GXYLT1Q4G148 440 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SLC35F1Q5T1Q4 408 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SLC6A19Q695T7 634 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SULF2Q8IWU5 870 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 MOSPD2Q8NHP6 518 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 DNAJA3Q96EY1 480 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 ARL5BQ96KC2 179 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 FN3KQ9H479 309 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 DUSP21Q9H596 190 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 AMBNQ9NP70 447 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 KLHL1Q9NR64 748 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 CMC2Q9NRP2 79 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 DNAJC27Q9NZQ0 273 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 PSORS1C1Q9UIG5 152 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 GPR52Q9Y2T5 361 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 SLC6A5Q9Y345 797 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 RPL36Q9Y3U8 105 aaKnown RBP16.24■□□□□ 0.19
VRK3-225ENST00000601912 SNX5Q9Y5X3 404 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 KCNMB2Q9Y691 235 aa16.24■□□□□ 0.19
VRK3-225ENST00000601912 CLCA1A8K7I4 914 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 M0R3G1 203 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 NME2P1O60361 137 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 MRPS14O60783 128 aaKnown RBP16.23■□□□□ 0.19
VRK3-225ENST00000601912 TSPAN19P0C672 248 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 NME2P22392 152 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 GDF1P27539 372 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 GRPRP30550 384 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 NUDT6P53370 316 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 FOXK1P85037 733 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 RPL18Q07020 188 aaKnown RBP16.23■□□□□ 0.19
VRK3-225ENST00000601912 FOXO1Q12778 655 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 PMS2P3Q13401 168 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms