RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RFC3P40938 356 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 CD47Q08722 323 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 HYAL4Q2M3T9 481 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 PGGHGQ32M88 737 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 SLC6A19Q695T7 634 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.36■□□□□ 0.85
IRF3-228ENST00000601291 ENTHD1Q8IYW4 607 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 DNAJA3Q96EY1 480 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 ARL5BQ96KC2 179 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 SFXN2Q96NB2 322 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 IFT27Q9BW83 186 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 QPCTLQ9NXS2 382 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 BAIAP2Q9UQB8 552 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 HDGFL3Q9Y3E1 203 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 PCDHGB7Q9Y5F8 929 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 PCDHGB5Q9Y5G0 923 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 CORINQ9Y5Q5 1042 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 FAM166BA8MTA8 275 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 BLOC1S5-TXNDC5H3BN57 136 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 LINC01387J3KSC0 135 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 GLSO94925 669 aaPredicted RBP20.35■□□□□ 0.85
IRF3-228ENST00000601291 FHL1Q13642 323 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 MAD2L1BPQ15013 274 aaPredicted RBP20.35■□□□□ 0.85
IRF3-228ENST00000601291 WIPI1Q5MNZ9 446 aaPredicted RBP20.35■□□□□ 0.85
IRF3-228ENST00000601291 UNQ6494/PRO21346Q6UXR6 183 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 ZNF786Q8N393 782 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 TMEM251Q8N6I4 163 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 OR5J2Q8NH18 312 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 SLC39A7Q92504 469 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 OR5B2Q96R09 309 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 RASSF1Q9NS23 344 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 TVP23BQ9NYZ1 205 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 RNF6Q9Y252 685 aa20.35■□□□□ 0.85
IRF3-228ENST00000601291 C1QTNF9BB2RNN3 333 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 FTCDNL1E5RQL4 147 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 HMGN1P05114 100 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 C1QTNF9P0C862 333 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 GRPRP30550 384 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 SFTPDP35247 375 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 RPL4P36578 427 aaKnown RBP20.34■□□□□ 0.85
IRF3-228ENST00000601291 B3GALT5-AS1P59052 145 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 PPIAP62937 165 aaKnown RBP20.34■□□□□ 0.85
IRF3-228ENST00000601291 RAC1P63000 192 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 MYBPHQ13203 477 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 OR7A5Q15622 319 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 SGCBQ16585 318 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 TMEM176BQ3YBM2 270 aaPredicted RBP20.34■□□□□ 0.85
IRF3-228ENST00000601291 ACSM5Q6NUN0 579 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 THSD4Q6ZMP0 1018 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 PTCHD4Q6ZW05 846 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 OR4Q3Q8NH05 313 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 FBLIM1Q8WUP2 373 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 TRUB1Q8WWH5 349 aaKnown RBP20.34■□□□□ 0.85
IRF3-228ENST00000601291 ALKBH4Q9NXW9 302 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 ASPMQ8IZT6 3477 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 BHLHE40O14503 412 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 TNFAIP8O95379 198 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 UQCRC1P31930 480 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 GRK5P34947 590 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 MAGEA5P43359 124 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 SNAPC1Q16533 368 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 ALG10Q5BKT4 473 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 LNX2Q8N448 690 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 OR8J1Q8NGP2 316 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 RELTQ969Z4 430 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 PLEKHA8Q96JA3 519 aa20.34■□□□□ 0.85
IRF3-228ENST00000601291 POLDIP3Q9BY77 421 aaKnown RBP20.34■□□□□ 0.85
IRF3-228ENST00000601291 SPTBN4Q9H254 2564 aa20.33■□□□□ 0.85
IRF3-228ENST00000601291 A0A087WV48 116 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 LIPT2A6NK58 231 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 IMPDH2P12268 514 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 HOXD11P31277 338 aaPredicted RBP20.33■□□□□ 0.84
IRF3-228ENST00000601291 AQP2P41181 271 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 CD97P48960 835 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 PCYT1AP49585 367 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 MYBPC1Q00872 1141 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 CDK5R2Q13319 367 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 PMS2P3Q13401 168 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 TBR1Q16650 682 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 CTU2Q2VPK5 515 aaKnown RBP20.33■□□□□ 0.84
IRF3-228ENST00000601291 GXYLT1Q4G148 440 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 DPY19L2P2Q6ZN68 376 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 FAM109AQ8N4B1 249 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 SCAIQ8N9R8 606 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 RHOXF1Q8NHV9 184 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 CNIH3Q8TBE1 160 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 SMPDL3BQ92485 455 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 GPX7Q96SL4 187 aaPredicted RBP20.33■□□□□ 0.84
IRF3-228ENST00000601291 ENKD1Q9H0I2 346 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 MRPL39Q9NYK5 338 aaKnown RBP20.33■□□□□ 0.84
IRF3-228ENST00000601291 ZNF226Q9NYT6 803 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 MYRFQ9Y2G1 1151 aa20.33■□□□□ 0.84
IRF3-228ENST00000601291 MCIDASD6RGH6 385 aa20.32■□□□□ 0.84
IRF3-228ENST00000601291 M0R082 166 aa20.32■□□□□ 0.84
IRF3-228ENST00000601291 M0R129 80 aa20.32■□□□□ 0.84
IRF3-228ENST00000601291 OR6A2O95222 327 aa20.32■□□□□ 0.84
IRF3-228ENST00000601291 PPP1R3DO95685 299 aa20.32■□□□□ 0.84
IRF3-228ENST00000601291 OPN1LWP04000 364 aa20.32■□□□□ 0.84
IRF3-228ENST00000601291 TSPAN19P0C672 248 aa20.32■□□□□ 0.84
IRF3-228ENST00000601291 NOS3P29474 1203 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms