RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 ELOA3DA6NLF2 546 aaPredicted RBP13.8□□□□□ -0.2
IRF3-226ENST00000600453 ANGPT2O15123 496 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 OR2T1O43869 369 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 AKR7A3O95154 331 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 AHSA1O95433 338 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 IGHV3-9P01782 118 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 PNMTP11086 282 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 PRG2P13727 222 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 PTAFRP25105 342 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
IRF3-226ENST00000600453 BSPH1Q075Z2 132 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 SCARB2Q14108 478 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 ELOA3BQ3SY89 546 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 DHRS4L2Q6PKH6 230 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 TMEM108Q6UXF1 575 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 AAED1Q7RTV5 226 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.8□□□□□ -0.2
IRF3-226ENST00000600453 NET1Q7Z628 596 aaPredicted RBP13.8□□□□□ -0.2
IRF3-226ENST00000600453 YTHDF3Q7Z739 585 aaKnown RBP13.8□□□□□ -0.2
IRF3-226ENST00000600453 ATG4DQ86TL0 474 aaPredicted RBP13.8□□□□□ -0.2
IRF3-226ENST00000600453 MSRB3Q8IXL7 192 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 DEPDC4Q8N2C3 294 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 TMEM99Q8N816 258 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 LSMEM1Q8N8F7 131 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 ELOA3Q8NG57 546 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 NFKBIDQ8NI38 313 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 PERPQ96FX8 193 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 SELENONQ9NZV5 590 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 RASD1Q9Y272 281 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 CHST2Q9Y4C5 530 aa13.8□□□□□ -0.2
IRF3-226ENST00000600453 USF3Q68DE3 2245 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 TRBV5-3A0A0A0MS03 114 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 DPRXA6NFQ7 191 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 EDF1O60869 148 aaKnown RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 RAMP1O60894 148 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 NPIPB7O75200 414 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 RAD51DO75771 328 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 INHBBP09529 407 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 EDNRAP25101 427 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 GTF2E2P29084 291 aaKnown RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 NTF4P34130 210 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 PTH2RP49190 550 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 RPS4XP62701 263 aaKnown RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 RBBP4Q09028 425 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 BNIP2Q12982 314 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 ZNF672Q499Z4 452 aaPredicted RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 DLEU7Q6UYE1 221 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 GPAT4Q86UL3 456 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 C17orf78Q8N4C9 275 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 DPP10Q8N608 796 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 HIPK4Q8NE63 616 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 C1orf162Q8NEQ5 155 aaPredicted RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 OR9K2Q8NGE7 335 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 SMAP2Q8WU79 429 aaPredicted RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 IGFBPL1Q8WX77 278 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 TMEM27Q9HBJ8 222 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 ZNF701Q9NV72 531 aaPredicted RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 ADPRHL2Q9NX46 363 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 LAMP3Q9UQV4 416 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 ANGPT4Q9Y264 503 aa13.79□□□□□ -0.2
IRF3-226ENST00000600453 MAGED1Q9Y5V3 778 aaPredicted RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 HEATR1Q9H583 2144 aaKnown RBP13.79□□□□□ -0.2
IRF3-226ENST00000600453 A0A0G2JND7 137 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 ATP8B1O43520 1251 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 KRT33AO76009 404 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 MPGP29372 298 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 NCALDP61601 193 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 MFSD13AQ14CX5 517 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 GABRA6Q16445 453 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 FAM91A1Q658Y4 838 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 ULK3Q6PHR2 472 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 C6orf89Q6UWU4 347 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 KRTAP1-3Q8IUG1 177 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 ARMC8Q8IUR7 673 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 SLC30A8Q8IWU4 369 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 C11orf65Q8NCR3 313 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 OR52E4Q8NGH9 312 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 LILRB1Q8NHL6 650 aaPredicted RBP13.78□□□□□ -0.2
IRF3-226ENST00000600453 GTPBP3Q969Y2 492 aaKnown RBP13.78□□□□□ -0.2
IRF3-226ENST00000600453 SLC47A1Q96FL8 570 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 SLCO5A1Q9H2Y9 848 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 NPHS2Q9NP85 383 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 CISD1Q9NZ45 108 aaKnown RBP13.78□□□□□ -0.2
IRF3-226ENST00000600453 AMDHD2Q9Y303 409 aa13.78□□□□□ -0.2
IRF3-226ENST00000600453 TMEM229AB2RXF0 380 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 PDLIM1O00151 329 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 FRS3O43559 492 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 WNT11O96014 354 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 VIMP08670 466 aaKnown RBP13.77□□□□□ -0.21
IRF3-226ENST00000600453 ATP5J2P56134 94 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 ETFDHQ16134 617 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 CREB3L2Q70SY1 520 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 DHDDSQ86SQ9 333 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 OR52N5Q8NH56 324 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 SLC25A36Q96CQ1 311 aa13.77□□□□□ -0.21
IRF3-226ENST00000600453 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
IRF3-226ENST00000600453 Q96MF0 132 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms