RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 BCL10O95999 233 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 ASAH2BP0C7U1 165 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 GADD45AP24522 165 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 TGFBR1P36897 503 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 CLK1P49759 484 aaKnown RBP13.76□□□□□ -0.21
HIF3A-218ENST00000600383 C1DQ13901 141 aaKnown RBP13.76□□□□□ -0.21
HIF3A-218ENST00000600383 ZNF791Q3KP31 576 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-218ENST00000600383 ALG10Q5BKT4 473 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 NANOGNBQ7Z5D8 188 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 PIP4P1Q86T03 277 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 GALNT15Q8N3T1 639 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 ESX1Q8N693 406 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 SLC15A4Q8N697 577 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 GATAD2BQ8WXI9 593 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 RASD2Q96D21 266 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 SECISBP2Q96T21 854 aaKnown RBP13.76□□□□□ -0.21
HIF3A-218ENST00000600383 NMNAT3Q96T66 252 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 TEAD3Q99594 435 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 FGF20Q9NP95 211 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-218ENST00000600383 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 HRH3Q9Y5N1 445 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 WIF1Q9Y5W5 379 aa13.76□□□□□ -0.21
HIF3A-218ENST00000600383 TRAV36DV7A0A075B6V5 113 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 LOC100506127A0A0U1RQW1 187 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 HTR3EA5X5Y0 456 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 RAB40ALP0C0E4 278 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 PRKCAP17252 672 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 PTGDSP41222 190 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 CTXN1P60606 82 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 RPS4XP62701 263 aaKnown RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 OPN5Q6U736 354 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 SLC43A2Q8N370 569 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 SIRT6Q8N6T7 355 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 NLGN4YQ8NFZ3 816 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 NDNFQ8TB73 568 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 TBX5Q99593 518 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 NRIP3Q9NQ35 241 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 ANKRD10Q9NXR5 420 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 LSM2Q9Y333 95 aaKnown RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 PNMA8CA0A1B0GUJ8 204 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 A8MVM7 634 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 AHCYL1O43865 530 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 IGF2P01344 180 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 MRPL3P09001 348 aaKnown RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 AHCYP23526 432 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 HTR3AP46098 478 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 SSR4P51571 173 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 ZNF41P51814 821 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 RPS3AP61247 264 aaKnown RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 RPL18Q07020 188 aaKnown RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 DNASE1L3Q13609 305 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 C1orf140Q5VVS0 124 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 LIPHQ8WWY8 451 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 Q96M85 177 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 OR51E2Q9H255 320 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 P4HTMQ9NXG6 502 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 HIF3AQ9Y2N7 669 aa13.75□□□□□ -0.21
HIF3A-218ENST00000600383 MRPS18BQ9Y676 258 aaKnown RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 CHCHD2Q9Y6H1 151 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-218ENST00000600383 RIF1Q5UIP0 2472 aaKnown RBP13.74□□□□□ -0.21
HIF3A-218ENST00000600383 ALPK2Q86TB3 2170 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 CELSR3Q9NYQ7 3312 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 C11orf98E9PRG8 122 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 M0R3G1 203 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 IMPA2O14732 288 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 DKK1O94907 266 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 ICAM2P13598 275 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 SH3BGRP55822 239 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-218ENST00000600383 Q0VFX4 171 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 SOWAHCQ53LP3 525 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-218ENST00000600383 RNLSQ5VYX0 342 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 SMAP2Q8WU79 429 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-218ENST00000600383 OPALINQ96PE5 141 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 CHCHD6Q9BRQ6 235 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 FKRPQ9H9S5 495 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 ZNF229Q9UJW7 825 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 FBXL2Q9UKC9 423 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 EXOGQ9Y2C4 368 aaKnown RBP13.74□□□□□ -0.21
HIF3A-218ENST00000600383 EML6Q6ZMW3 1958 aa13.74□□□□□ -0.21
HIF3A-218ENST00000600383 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 TEX13CA0A0J9YWL9 993 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 TRIM64BA6NI03 449 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 SLC22A31A6NKX4 558 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 G3V3Y1 287 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 CCRL2O00421 344 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 SLC22A1O15245 554 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 BGLAPP02818 100 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 FTH1P19P0C7X4 201 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 LIMS3P0CW19 117 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 LIMS4P0CW20 117 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 CD79BP40259 229 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 LIPKQ5VXJ0 399 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 B3GNTL1Q67FW5 361 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-218ENST00000600383 OR5M1Q8NGP8 315 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 ST8SIA1Q92185 356 aa13.73□□□□□ -0.21
HIF3A-218ENST00000600383 GRHPRQ9UBQ7 328 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms