RNA–Protein interactions for RNA: ENST00000596983.1

MCM3-206, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 3

Gene MCM3, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-206ENST00000596983 NRGNQ92686 78 aa13.34□□□□□ -0.27
MCM3-206ENST00000596983 CENPNQ96H22 339 aaPredicted RBP13.34□□□□□ -0.27
MCM3-206ENST00000596983 PKP2Q99959 881 aa13.34□□□□□ -0.27
MCM3-206ENST00000596983 TMEM43Q9BTV4 400 aa13.34□□□□□ -0.27
MCM3-206ENST00000596983 BDH2Q9BUT1 245 aa13.34□□□□□ -0.27
MCM3-206ENST00000596983 SLC19A3Q9BZV2 496 aa13.34□□□□□ -0.27
MCM3-206ENST00000596983 NTN4Q9HB63 628 aa13.34□□□□□ -0.27
MCM3-206ENST00000596983 C6orf203Q9P0P8 240 aaPredicted RBP13.34□□□□□ -0.27
MCM3-206ENST00000596983 STX18Q9P2W9 335 aaKnown RBP13.34□□□□□ -0.27
MCM3-206ENST00000596983 CHRNA9Q9UGM1 479 aa13.34□□□□□ -0.27
MCM3-206ENST00000596983 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
MCM3-206ENST00000596983 IGKV1D-42A0A075B6H8 117 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 TMED7-TICAM2A0A0A6YYA0 188 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 ARRDC5A6NEK1 342 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 SHISA8B8ZZ34 492 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 H0Y3Z8 333 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 ZNF208O43345 1280 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 IGF2P01344 180 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 ANPEPP15144 967 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 FPR1P21462 350 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 CHMP24386 653 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 TOMM20Q15388 145 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 EXOC3L2Q2M3D2 409 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 WIPI1Q5MNZ9 446 aaPredicted RBP13.33□□□□□ -0.28
MCM3-206ENST00000596983 C5orf46Q6UWT4 87 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 YRDCQ86U90 279 aaKnown RBP13.33□□□□□ -0.28
MCM3-206ENST00000596983 ADGRG3Q86Y34 549 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 NKAIN4Q8IVV8 208 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 TMEM255BQ8WV15 326 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 ACOT11Q8WXI4 607 aaPredicted RBP13.33□□□□□ -0.28
MCM3-206ENST00000596983 HS6ST2Q96MM7 605 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 SFXN2Q96NB2 322 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 PSD2Q9BQI7 771 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 RPH3AQ9Y2J0 694 aaPredicted RBP13.33□□□□□ -0.28
MCM3-206ENST00000596983 TMED7Q9Y3B3 224 aa13.33□□□□□ -0.28
MCM3-206ENST00000596983 SPIN1Q9Y657 262 aaPredicted RBP13.33□□□□□ -0.28
MCM3-206ENST00000596983 ANKHD1Q8IWZ3 2542 aaKnown RBP13.32□□□□□ -0.28
MCM3-206ENST00000596983 A0A087WUU8 490 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 SH3PXD2BA1X283 911 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 GNGT2O14610 69 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 FZD7O75084 574 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 NPIPB7O75200 414 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 TRAPPC6AO75865 159 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 TCEA1P23193 301 aaKnown RBP13.32□□□□□ -0.28
MCM3-206ENST00000596983 CXCR1P25024 350 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 FKBP2P26885 142 aaKnown RBP13.32□□□□□ -0.28
MCM3-206ENST00000596983 UGT2B15P54855 530 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 SYT14P1Q58G82 188 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 NHSL2Q5HYW2 709 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 SHQ1Q6PI26 577 aaKnown RBP13.32□□□□□ -0.28
MCM3-206ENST00000596983 SEM1Q6ZVN7 128 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 AMIGO2Q86SJ2 522 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 EPHX4Q8IUS5 362 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 SVOPLQ8N434 492 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 STK35Q8TDR2 534 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 TMEM239Q8WW34 195 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 NRBF2Q96F24 287 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 ALPK1Q96QP1 1244 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 SERINC1Q9NRX5 453 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 KIAA1549Q9HCM3 1950 aa13.32□□□□□ -0.28
MCM3-206ENST00000596983 ITPR3Q14573 2671 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 TMEM72A0PK05 275 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 HSPB2A8KAH6 182 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 A8MVM7 634 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 CASQ2O14958 399 aaPredicted RBP13.31□□□□□ -0.28
MCM3-206ENST00000596983 EFNA2O43921 213 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 E2F6O75461 281 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 CTAG2O75638 210 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 ATP6V1G2O95670 118 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 IL11P20809 199 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 GCKP35557 465 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 IST1P53990 364 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 RAC1P63000 192 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 EGR4Q05215 589 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 SNTB1Q13884 538 aaKnown RBP13.31□□□□□ -0.28
MCM3-206ENST00000596983 SEC23BQ15437 767 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 HSPB2Q16082 182 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 ACSF3Q4G176 576 aaPredicted RBP13.31□□□□□ -0.28
MCM3-206ENST00000596983 DCST1Q5T197 706 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
MCM3-206ENST00000596983 PODNL1Q6PEZ8 512 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 POMZP3Q6PJE2 187 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 TMEM179BQ7Z7N9 219 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 RNF113BQ8IZP6 322 aaKnown RBP13.31□□□□□ -0.28
MCM3-206ENST00000596983 LINC00471Q8N535 108 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 RELL2Q8NC24 303 aaPredicted RBP13.31□□□□□ -0.28
MCM3-206ENST00000596983 OR4K5Q8NGD3 323 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 OR5M1Q8NGP8 315 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 OR52J3Q8NH60 311 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 OR5K1Q8NHB7 308 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 GABARAPL1Q9H0R8 117 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 MEPEQ9NQ76 525 aaPredicted RBP13.31□□□□□ -0.28
MCM3-206ENST00000596983 AP4B1Q9Y6B7 739 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 U3KQV3 271 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 MED12Q93074 2177 aa13.31□□□□□ -0.28
MCM3-206ENST00000596983 HTR3EA5X5Y0 456 aa13.3□□□□□ -0.28
MCM3-206ENST00000596983 KDM4EB2RXH2 506 aaPredicted RBP13.3□□□□□ -0.28
MCM3-206ENST00000596983 CCNB2O95067 398 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms