RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 OR52D1Q9H346 318 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 ZNF696Q9H7X3 374 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 SERINC1Q9NRX5 453 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 RNF6Q9Y252 685 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 VDAC3Q9Y277 283 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 ZNF337Q9Y3M9 751 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 KCNMB2Q9Y691 235 aa12.17□□□□□ -0.46
VMP1-217ENST00000593168 SPTBN1Q01082 2364 aaKnown RBP12.16□□□□□ -0.46
VMP1-217ENST00000593168 OR5H15A6NDH6 313 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 A6NL46 340 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 OR2T1O43869 369 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 MT-ATP6P00846 226 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 HMGN1P05114 100 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 CCDC159P0C7I6 412 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 GABRB1P18505 474 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 CCNA2P20248 432 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 DNASE1L1P49184 302 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 FXYD6P3P58550 94 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 SNRPGP62308 76 aaKnown RBP12.16□□□□□ -0.46
VMP1-217ENST00000593168 CSNK2BP67870 215 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 LTBQ06643 244 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 GLYR1Q49A26 553 aaPredicted RBP12.16□□□□□ -0.46
VMP1-217ENST00000593168 KCTD21Q4G0X4 260 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 SPINK14Q6IE38 97 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 ACSM5Q6NUN0 579 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 SMARCD3Q6STE5 483 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 CASP12Q6UXS9 341 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 OR8J1Q8NGP2 316 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 OR51A7Q8NH64 312 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 FANK1Q8TC84 345 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 HAS2Q92819 552 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 UBE2FQ969M7 185 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 KTI12Q96EK9 354 aaPredicted RBP12.16□□□□□ -0.46
VMP1-217ENST00000593168 DTNBP1Q96EV8 351 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 SAMD8Q96LT4 415 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 GNRHR2Q96P88 292 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 SIGLEC12Q96PQ1 595 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 TNFRSF13CQ96RJ3 184 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 POLDIP3Q9BY77 421 aaKnown RBP12.16□□□□□ -0.46
VMP1-217ENST00000593168 POTEKPQ9BYX7 375 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 PRRG3Q9BZD7 231 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 FKRPQ9H9S5 495 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 TBC1D23Q9NUY8 699 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 IMPAD1Q9NX62 359 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 ZNF226Q9NYT6 803 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 CHRNA9Q9UGM1 479 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 ZNF229Q9UJW7 825 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 BAIAP2Q9UQB8 552 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 MRPS18CQ9Y3D5 142 aaKnown RBP12.16□□□□□ -0.46
VMP1-217ENST00000593168 CNTRLQ7Z7A1 2325 aa12.16□□□□□ -0.46
VMP1-217ENST00000593168 G3V3Y1 287 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 WBP4O75554 376 aaKnown RBP12.15□□□□□ -0.46
VMP1-217ENST00000593168 CEACAM4O75871 244 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 AHSA1O95433 338 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 BGLAPP02818 100 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 ASAH2BP0C7U1 165 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 GNLYP22749 145 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 DPP4P27487 766 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 ELK4P28324 431 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 SRD5A2P31213 254 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 CLK1P49759 484 aaKnown RBP12.15□□□□□ -0.46
VMP1-217ENST00000593168 CCL11P51671 97 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
VMP1-217ENST00000593168 EFNB1P98172 346 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 FHL1Q13642 323 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 TMEM44Q2T9K0 475 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.15□□□□□ -0.462e-7■■■■■ 32.6
VMP1-217ENST00000593168 C1orf140Q5VVS0 124 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 LAIR2Q6ISS4 152 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 SLC25A25Q6KCM7 469 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 POMZP3Q6PJE2 187 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 IGFL2Q6UWQ7 119 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 PTCHD4Q6ZW05 846 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 GTPBP8Q8N3Z3 284 aaPredicted RBP12.15□□□□□ -0.46
VMP1-217ENST00000593168 TEX19Q8NA77 164 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 MDS2Q8NDY4 140 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 OR2T33Q8NG76 320 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 OR52L1Q8NGH7 329 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 OR4Q3Q8NH05 313 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 APH1BQ8WW43 257 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 TAAR8Q969N4 342 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 ZNF566Q969W8 418 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 JSRP1Q96MG2 331 aaPredicted RBP12.15□□□□□ -0.46
VMP1-217ENST00000593168 SLC38A2Q96QD8 506 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 NPAS1Q99742 590 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 FAM173AQ9BQD7 235 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 PTDSS2Q9BVG9 487 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 UBQLN3Q9H347 655 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 MCCC2Q9HCC0 563 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 ZFP64Q9NPA5 681 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 NANSQ9NR45 359 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 RASSF1Q9NS23 344 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 DEPPQ9NTK1 212 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 TUBA8Q9NY65 449 aaPredicted RBP12.15□□□□□ -0.46
VMP1-217ENST00000593168 TVP23BQ9NYZ1 205 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 PLA2G3Q9NZ20 509 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 BLOC1S6Q9UL45 172 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 BOKQ9UMX3 212 aaPredicted RBP12.15□□□□□ -0.46
VMP1-217ENST00000593168 SPIN1Q9Y657 262 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms