RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 J3KTA2 159 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 hCG_2039718K7EN88 272 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 ACOT8O14734 319 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 EEF1E1O43324 174 aaKnown RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 SS18L1O75177 396 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 AKR7A3O95154 331 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 KIR2DL2P43627 348 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 VLDLRP98155 873 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 RASGEF1BQ0VAM2 473 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 TRAP1Q12931 704 aaKnown RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 FOXD4Q12950 439 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 GUSBP1Q15486 140 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 OTUD3Q5T2D3 398 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 PGM2L1Q6PCE3 622 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 PAQR6Q6TCH4 344 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 NKAIN4Q8IVV8 208 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 RELL2Q8NC24 303 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 PIGXQ8TBF5 258 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 TAAR8Q969N4 342 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 SLC25A36Q96CQ1 311 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 C7orf34Q96L11 122 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 PRSS27Q9BQR3 290 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF426Q9BUY5 554 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 SLC19A3Q9BZV2 496 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 UCK2Q9BZX2 261 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 TRIM15Q9C019 465 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 GP6Q9HCN6 339 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 KCNJ16Q9NPI9 418 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 NDUFAF4Q9P032 175 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 KLHL13Q9P2N7 655 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 RHCGQ9UBD6 479 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 FAM32AQ9Y421 112 aaKnown RBP13.32□□□□□ -0.28
DDX39A-221ENST00000593026 TCRBV5S2A0A599 114 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 NKX2-6A6NCS4 301 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF814B7Z6K7 855 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 FTCDNL1E5RQL4 147 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 KPNA4O00629 521 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 FFAR1O14842 300 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 SEMG1P04279 462 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 ITGA2P17301 1181 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 AGTR1P30556 359 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 RBM34P42696 430 aaKnown RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 H3F3AP84243 136 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 MFSD13AQ14CX5 517 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 TRAM2Q15035 370 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 TMEM201Q5SNT2 666 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 VWA1Q6PCB0 445 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 TSEN54Q7Z6J9 526 aaKnown RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 CCDC103Q8IW40 242 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 OR6S1Q8NH40 331 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 TMEM255BQ8WV15 326 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 POP5Q969H6 163 aaKnown RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 PSMG3-AS1Q96PY0 264 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF300Q96RE9 604 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 SEPHS2Q99611 448 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 TACO1Q9BSH4 297 aaKnown RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 LRMDAQ9H2I8 198 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 PIGMQ9H3S5 423 aa13.31□□□□□ -0.28
DDX39A-221ENST00000593026 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 C6orf203Q9P0P8 240 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 KLF2Q9Y5W3 355 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-221ENST00000593026 AQP7P3A6NL99 342 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 RAMP1O60894 148 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 SMNDC1O75940 238 aaKnown RBP eCLIP13.3□□□□□ -0.285e-10■■□□□ 12.4
DDX39A-221ENST00000593026 CLDN1O95832 211 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 FABP3P05413 133 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 YES1P07947 543 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 RHCEP18577 417 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 CBLP22681 906 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 ASCL1P50553 236 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 FLOT2Q14254 428 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 PDK3Q15120 406 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 MAMDC2Q7Z304 686 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-221ENST00000593026 BTLAQ7Z6A9 289 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 TUSC5Q8IXB3 177 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 TMEM99Q8N816 258 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 OR6K3Q8NGY3 331 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 TMEM239Q8WW34 195 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 STARD4Q96DR4 205 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 HS6ST2Q96MM7 605 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 PIP5K1AQ99755 562 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 ASPNQ9BXN1 380 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 KLHL4Q9C0H6 718 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 MMADHCQ9H3L0 296 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-221ENST00000593026 BCO1Q9HAY6 547 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 EMC3Q9P0I2 261 aa13.3□□□□□ -0.28
DDX39A-221ENST00000593026 ING1Q9UK53 422 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-221ENST00000593026 IGKV3D-15A0A087WSY6 115 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF716A6NP11 495 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF724A8MTY0 619 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 PRSS44E7EML9 344 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 M0R082 166 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 GPR171O14626 319 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 FZD7O75084 574 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 DIRAS1O95057 198 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 PRSS23O95084 383 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 MT-ATP6P00846 226 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms