RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 AGAP6Q5VW22 663 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 OR7E24Q6IFN5 339 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 SLC2A7Q6PXP3 512 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 TMEM108Q6UXF1 575 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 RNF130Q86XS8 419 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 HIPK1Q86Z02 1210 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 OR10H5Q8NGA6 315 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF563Q8TA94 476 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 PIGXQ8TBF5 258 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 APH1AQ96BI3 265 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 BOD1Q96IK1 185 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 TRNT1Q96Q11 434 aaKnown RBP9.15□□□□□ -0.94
VPS4B-207ENST00000591519 AMBRA1Q9C0C7 1298 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ALG2Q9H553 416 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 MTHFD2LQ9H903 347 aaPredicted RBP9.15□□□□□ -0.94
VPS4B-207ENST00000591519 SLC6A13Q9NSD5 602 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ASB6Q9NWX5 421 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 TAS2R16Q9NYV7 291 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 TMEM181Q9P2C4 612 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 MALT1Q9UDY8 824 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 B3GALT5Q9Y2C3 310 aa9.15□□□□□ -0.94
VPS4B-207ENST00000591519 ATRQ13535 2644 aa9.15□□□□□ -0.95
VPS4B-207ENST00000591519 FBN1P35555 2871 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CIB4A0PJX0 185 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 E7EQL1 145 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 HMGN4O00479 90 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CD5LO43866 347 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 EIF1BO60739 113 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 MRPL33O75394 65 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CD40P25942 277 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 TTKP33981 857 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 RYKP34925 604 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 MDH1P40925 334 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 MAGEA8P43361 318 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 IDH2P48735 452 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 KHKP50053 298 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 GYS2P54840 703 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 SLC35A1P78382 337 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 FAPQ12884 760 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 SQLEQ14534 574 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 SLC17A1Q14916 467 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 GABRA6Q16445 453 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 COX20Q5RI15 118 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 C11orf71Q6IPW1 123 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CGB2Q6NT52 195 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CXXC5Q7LFL8 322 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 FUNDC1Q8IVP5 155 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CCDC103Q8IW40 242 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 UBE2J2Q8N2K1 259 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 TRIML2Q8N7C3 387 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 WDR31Q8NA23 367 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 MAPK1IP1LQ8NDC0 245 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CNOT9Q92600 299 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 AURKBQ96GD4 344 aaPredicted RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 ITCHQ96J02 903 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 HS6ST2Q96MM7 605 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 DHRS9Q9BPW9 319 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 RHNO1Q9BSD3 238 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 KRTAP4-8Q9BYQ9 185 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 ADAM19Q9H013 955 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 SLC38A1Q9H2H9 487 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 RMND5AQ9H871 391 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 CBLN4Q9NTU7 201 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 PARPBPQ9NWS1 579 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 OSGIN1Q9UJX0 560 aa9.14□□□□□ -0.95
VPS4B-207ENST00000591519 HEATR1Q9H583 2144 aaKnown RBP9.14□□□□□ -0.95
VPS4B-207ENST00000591519 A0A096LNT2 108 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 TMED7-TICAM2A0A0A6YYA0 188 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 CCT8L1PA6NM43 557 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 CLDN24A6NM45 220 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 RAD51DO75771 328 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 IGHV3-9P01782 118 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 TP53P04637 393 aaPredicted RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 ITGA5P08648 1049 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 IMPDH2P12268 514 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 RPS4Y1P22090 263 aaKnown RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 SLC1A3P43003 542 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 ANXA11P50995 505 aaKnown RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 POLR2HP52434 150 aaKnown RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 ARFIP2P53365 341 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 CDH11P55287 796 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 DSCR9P59020 149 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 LRRC74AQ0VAA2 488 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 SYPL1Q16563 259 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 GPAT3Q53EU6 434 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 KLHL17Q6TDP4 642 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 LRRC74BQ6ZQY2 392 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 C17orf78Q8N4C9 275 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 C1orf162Q8NEQ5 155 aaPredicted RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 OR52N5Q8NH56 324 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 SPDL1Q96EA4 605 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 ADAD1Q96M93 576 aaKnown RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 NAA11Q9BSU3 229 aaPredicted RBP9.13□□□□□ -0.95
VPS4B-207ENST00000591519 OR11A1Q9GZK7 315 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 FAM107BQ9H098 131 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 PIF1Q9H611 641 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 TMED7Q9Y3B3 224 aa9.13□□□□□ -0.95
VPS4B-207ENST00000591519 FLVCR1Q9Y5Y0 555 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms