RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF607Q96SK3 696 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 XRN2Q9H0D6 950 aaKnown RBP eCLIP14□□□□□ -0.174e-7■■■■□ 20.4
CIRBP-228ENST00000590347 UFSP2Q9NUQ7 469 aa14□□□□□ -0.17
CIRBP-228ENST00000590347 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
CIRBP-228ENST00000590347 A0A0B4J2A0 478 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 A0A1W2PPH5 198 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 NPIPB8E9PQR5 432 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 PPM1DO15297 605 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 KLKB1P03952 638 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 NTSP30990 170 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 ATP1B3P54709 279 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 ADGRF1Q5T601 910 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 LIPJQ5W064 366 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 FAM199XQ6PEV8 388 aaPredicted RBP13.99□□□□□ -0.17
CIRBP-228ENST00000590347 CCDC54Q8NEL0 328 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 GTF3AQ92664 365 aaKnown RBP13.99□□□□□ -0.17
CIRBP-228ENST00000590347 PGLYRP3Q96LB9 341 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 TGM7Q96PF1 710 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 DEFB118Q96PH6 123 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 NOX4Q9NPH5 578 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 STOX2Q9P2F5 926 aaPredicted RBP13.99□□□□□ -0.17
CIRBP-228ENST00000590347 SHPKQ9UHJ6 478 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 SCML2Q9UQR0 700 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 IRGMA1A4Y4 181 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF729A6NN14 1252 aaPredicted RBP13.99□□□□□ -0.17
CIRBP-228ENST00000590347 TXNDC12O95881 172 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 MT-ND5P03915 603 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 ARG1P05089 322 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 PDHA2P29803 388 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 LASP1Q14847 261 aaKnown RBP13.99□□□□□ -0.17
CIRBP-228ENST00000590347 ENTPD8Q5MY95 495 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 TTLL10Q6ZVT0 673 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 STX12Q86Y82 276 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 WFDC5Q8TCV5 224 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 FATE1Q969F0 183 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 C14orf144Q96I85 54 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 FN3KQ9H479 309 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 MRPL17Q9NRX2 175 aaKnown RBP13.99□□□□□ -0.17
CIRBP-228ENST00000590347 PCDHB8Q9UN66 801 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 FBXO45P0C2W1 286 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 UQCRC2P22695 453 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 HTR2AP28223 471 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 SPAM1P38567 509 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 POM121L1PQ3SYA9 428 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 HIST1H2BAQ96A08 127 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 POM121Q96HA1 1249 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 KLHL31Q9H511 634 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 LHX3Q9UBR4 397 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 MYO16Q9Y6X6 1858 aa13.99□□□□□ -0.17
CIRBP-228ENST00000590347 A0A1W2PS29 197 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 OR5H14A6NHG9 310 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 H3BNC9 293 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 PMP2P02689 132 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 CHRM4P08173 479 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 C8orf89P0DMQ9 161 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 MRPL58Q14197 206 aaKnown RBP13.98□□□□□ -0.17
CIRBP-228ENST00000590347 SSX2Q16385 188 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 NDUFAF6Q330K2 333 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 SLC25A30Q5SVS4 291 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 MED27Q6P2C8 311 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 DMBX1Q8NFW5 382 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 ZMYND19Q96E35 227 aaPredicted RBP13.98□□□□□ -0.17
CIRBP-228ENST00000590347 C16orf58Q96GQ5 468 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 SELENOIQ9C0D9 397 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 CACYBPQ9HB71 228 aaKnown RBP13.98□□□□□ -0.17
CIRBP-228ENST00000590347 EPHA6Q9UF33 1036 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 PLAGL1Q9UM63 463 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 GXYLT2A0PJZ3 443 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 UBE2CO00762 179 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 ABOP16442 354 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 ITPKBP27987 946 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 GABRR2P28476 465 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 SMIM11AP58511 58 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 AP3S2P59780 193 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 EEF1A1P68104 462 aaKnown RBP13.98□□□□□ -0.17
CIRBP-228ENST00000590347 PYY3Q5JQD4 70 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 EEF1A1P5Q5VTE0 462 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 HACD4Q5VWC8 232 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 FAM71E1Q6IPT2 247 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 STEAP2Q8NFT2 490 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF296Q8WUU4 475 aaPredicted RBP13.98□□□□□ -0.17
CIRBP-228ENST00000590347 SMOC1Q9H4F8 434 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 UQCC1Q9NVA1 299 aa13.98□□□□□ -0.17
CIRBP-228ENST00000590347 C9JQL5 133 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 GABARAPH6UMI1 98 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 M0QYG6 137 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 ZNF821O75541 412 aaPredicted RBP13.97□□□□□ -0.17
CIRBP-228ENST00000590347 GTF2F2P13984 249 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 RPA2P15927 270 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 KRT33BQ14525 404 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 TSC22D1Q15714 1073 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 GRHL2Q6ISB3 625 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 RHOUQ7L0Q8 258 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 ABHD13Q7L211 337 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 SLC36A1Q7Z2H8 476 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 ARMC10Q8N2F6 343 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 OR4E2Q8NGC2 313 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 IL17FQ96PD4 163 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 GFI1Q99684 422 aa13.97□□□□□ -0.17
CIRBP-228ENST00000590347 UBQLN3Q9H347 655 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms