RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 EIF1BO60739 113 aaKnown RBP16.1■□□□□ 0.17
DDX39A-212ENST00000590260 GOSR1O95249 250 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 GPIP06744 558 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 COX5AP20674 150 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 PTNP21246 168 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 RPS5P46782 204 aaKnown RBP16.1■□□□□ 0.17
DDX39A-212ENST00000590260 IST1P53990 364 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 LTBQ06643 244 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 LINC00114Q6XXX2 140 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 WDR88Q6ZMY6 472 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 OR10A4Q9H209 315 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 ADPRHL2Q9NX46 363 aa16.1■□□□□ 0.17
DDX39A-212ENST00000590260 NOSIPQ9Y314 301 aaKnown RBP16.1■□□□□ 0.17
DDX39A-212ENST00000590260 MYO9AB2RTY4 2548 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 ELOA3DA6NLF2 546 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-212ENST00000590260 PDLIM1O00151 329 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 LYZL6O75951 148 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 C8BP07358 591 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 TNFRSF1BP20333 461 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 CDH12P55289 794 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 ITGADQ13349 1161 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 TAB1Q15750 504 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 ELOA3BQ3SY89 546 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 ALG10BQ5I7T1 473 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 FAM91A1Q658Y4 838 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 PATL1Q86TB9 770 aaKnown RBP16.09■□□□□ 0.17
DDX39A-212ENST00000590260 SLC30A8Q8IWU4 369 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 SLC15A3Q8IY34 581 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 ELOA3Q8NG57 546 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 MFSD8Q8NHS3 518 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 PIK3IP1Q96FE7 263 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 MCHR1Q99705 422 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 NAA11Q9BSU3 229 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-212ENST00000590260 FAM107BQ9H098 131 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 ZNF226Q9NYT6 803 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 EMC3Q9P0I2 261 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 B3GAT1Q9P2W7 334 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 PLEKHA6Q9Y2H5 1048 aa16.09■□□□□ 0.17
DDX39A-212ENST00000590260 A0A087WUJ7 227 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-212ENST00000590260 FAM220BPB1ANY3 271 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 NME4O00746 187 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 GPR171O14626 319 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 AIM2O14862 343 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 CASKO14936 926 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 CCDC22O60826 627 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 PLAUP00749 431 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 PNMTP11086 282 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 PPP3CBP16298 524 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 VEZF1Q14119 521 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 P2RY6Q15077 328 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 FBXW9Q5XUX1 488 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 ULK3Q6PHR2 472 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 PAMR1Q6UXH9 720 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 EPHX4Q8IUS5 362 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 KDM8Q8N371 416 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 ZNF433Q8N7K0 673 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-212ENST00000590260 PCYOX1LQ8NBM8 494 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 BHLHE22Q8NFJ8 381 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-212ENST00000590260 OR9K2Q8NGE7 335 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 VANGL1Q8TAA9 524 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-212ENST00000590260 DNAJA4Q8WW22 397 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-212ENST00000590260 TMEM45BQ96B21 275 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 SH3GL1Q99961 368 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 ECSITQ9BQ95 431 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 CCM2LQ9NUG4 571 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-212ENST00000590260 RPS6KB2Q9UBS0 482 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 MALT1Q9UDY8 824 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 CELSR1Q9NYQ6 3014 aa16.08■□□□□ 0.16
DDX39A-212ENST00000590260 SPG11Q96JI7 2443 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 GMNCA6NCL1 334 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 LRRN3E7EW58 273 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 ATE1O95260 518 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 AHSA1O95433 338 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 BGLAPP02818 100 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 ITGA5P08648 1049 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 LGALS3BPQ08380 585 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 ENTPD8Q5MY95 495 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 TSPO2Q5TGU0 170 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 BHLHA15Q7RTS1 189 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-212ENST00000590260 WFDC8Q8IUA0 241 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 WDFY1Q8IWB7 410 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 ZNF100Q8IYN0 542 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 STEAP2Q8NFT2 490 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 APH1AQ96BI3 265 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 SLC25A36Q96CQ1 311 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 SLC47A1Q96FL8 570 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 SF3B5Q9BWJ5 86 aaKnown RBP16.07■□□□□ 0.16
DDX39A-212ENST00000590260 PCDHAC1Q9H158 963 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 SLC7A10Q9NS82 523 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 GID8Q9NWU2 228 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 CREBBPQ92793 2442 aa16.07■□□□□ 0.16
DDX39A-212ENST00000590260 ABCA4P78363 2273 aa16.06■□□□□ 0.16
DDX39A-212ENST00000590260 CPSF4LA6NMK7 179 aaKnown RBP16.06■□□□□ 0.16
DDX39A-212ENST00000590260 FMO6PO60774 539 aa16.06■□□□□ 0.16
DDX39A-212ENST00000590260 MRPL33O75394 65 aaKnown RBP16.06■□□□□ 0.16
DDX39A-212ENST00000590260 CNOT4O95628 575 aaKnown RBP16.06■□□□□ 0.16
DDX39A-212ENST00000590260 FUT4P22083 530 aa16.06■□□□□ 0.16
DDX39A-212ENST00000590260 GRPRP30550 384 aa16.06■□□□□ 0.16
DDX39A-212ENST00000590260 GNGT1P63211 74 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms