RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 POMT2Q9UKY4 750 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 CHST2Q9Y4C5 530 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 F5H5K5 113 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 GRK5P34947 590 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 MAGEB1P43366 347 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 FABP5Q01469 135 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 LYPD4Q6UWN0 246 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 OR5L2Q8NGL0 311 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 PMM1Q92871 262 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 CTSFQ9UBX1 484 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 EFCAB7A8K855 629 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 IDSB3KWA1 339 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 TP53I11O14683 189 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF43P17038 809 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 HTR1FP30939 366 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 TGFBR2P37173 567 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 RIDAP52758 137 aaKnown RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 AP3S2P59780 193 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 TMEM176BQ3YBM2 270 aaPredicted RBP13.41□□□□□ -0.26
RETREG3-208ENST00000589797 LANCL3Q6ZV70 420 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 FCRLAQ7L513 359 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 PM20D2Q8IYS1 436 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 OR8D4Q8NGM9 314 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 ELOVL3Q9HB03 270 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 IFT46Q9NQC8 304 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 PISDQ9UG56 409 aa13.41□□□□□ -0.26
RETREG3-208ENST00000589797 CHP2O43745 196 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 HBQ1P09105 142 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 GTF2F2P13984 249 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 PGAM2P15259 253 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 EIF2B1Q14232 305 aaKnown RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 NKAIN1Q4KMZ8 207 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 FAM199XQ6PEV8 388 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 CBLN3Q6UW01 205 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 THSD4Q6ZMP0 1018 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 CCDC80Q76M96 950 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 PRSS45Q7RTY3 260 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 LYSMD2Q8IV50 215 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 OR8H3Q8N146 312 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 PIAS4Q8N2W9 510 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 DEFB123Q8N688 67 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 ABHD4Q8TB40 342 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 SLC2A12Q8TD20 617 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 YIPF6Q96EC8 236 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 NEDD4LQ96PU5 975 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 BCL7BQ9BQE9 202 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 INIPQ9NRY2 104 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 RBM7Q9Y580 266 aaKnown RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 PRAMEF25A6NGN4 478 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 SBK2P0C263 348 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 CD300CQ08708 224 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 AKIRIN2Q53H80 203 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF227Q86WZ6 799 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 RNF113BQ8IZP6 322 aaKnown RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 CADM3Q8N126 398 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 CHPT1Q8WUD6 406 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 ASB15Q8WXK1 588 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 TRPV4Q9HBA0 871 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 C2orf42Q9NWW7 574 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 A0A1B0GVI7 797 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 SHISA8B8ZZ34 492 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 SIGLEC6O43699 453 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 ICOSLGO75144 302 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 EFEMP2O95967 443 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 LIPCP11150 499 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 GABRA5P31644 462 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 OR10A3P58181 314 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 GMFBP60983 142 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 SPOCK1Q08629 439 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 C9orf135Q5VTT2 229 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 Q6ZNX1 250 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 RNF165Q6ZSG1 346 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 ADAMTS18Q8TE60 1221 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 INTS14Q96SY0 518 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 THAP7Q9BT49 309 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 RNF121Q9H920 327 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 PLCXD1Q9NUJ7 323 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 VSX1Q9NZR4 365 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-208ENST00000589797 TMEM14AQ9Y6G1 99 aa13.4□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF318Q5VUA4 2279 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 NOTCH4Q99466 2003 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 SUSD5O60279 629 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 HSD17B7P56937 341 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 SIRPAP78324 504 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 GAB4Q2WGN9 574 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 CDH24Q86UP0 819 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 ACOXLQ9NUZ1 547 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 MEIOCA2RUB1 952 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 PRAMEF27A3QJZ7 478 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 NPIPA2E9PIF3 369 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 NPIPA3F8WFD2 350 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-208ENST00000589797 IL1AP01583 271 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 SLC2A1P11166 492 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms