RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 KIR2DL3P43628 341 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ARL4DP49703 201 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SNRPNP63162 240 aaKnown RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 GABREP78334 506 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ID3Q02535 119 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 DLX2Q07687 328 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ISXQ2M1V0 245 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 C4orf46Q504U0 113 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 TIGD3Q6B0B8 471 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PYHIN1Q6K0P9 492 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM53Q6P2H8 277 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SFXN4Q6P4A7 337 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 RPL22L1Q6P5R6 122 aaKnown RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 BAIAP2L2Q6UXY1 529 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 LINC00114Q6XXX2 140 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 KCTD20Q7Z5Y7 419 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SAMD12Q8N8I0 201 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 RCBTB1Q8NDN9 531 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 OR7G1Q8NGA0 311 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SLC7A6Q92536 515 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 RFT1Q96AA3 541 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CREB3L1Q96BA8 519 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PEX11GQ96HA9 241 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 KCNJ15Q99712 375 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 GPR174Q9BXC1 333 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ENKD1Q9H0I2 346 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 FAM60AQ9NP50 221 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 UBQLN4Q9NRR5 601 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM74BQ9NUR3 256 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 FLRT3Q9NZU0 649 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CRIM1Q9NZV1 1036 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ABRACLQ9P1F3 81 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 MALT1Q9UDY8 824 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 F5P12259 2224 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 H0YIG0 161 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ARPC3O15145 178 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 LRRTM2O43300 516 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GPRIN2O60269 458 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SLC43A1O75387 559 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 NCR1O76036 304 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 DHFRP00374 187 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 IGF2P01344 180 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 PROS1P07225 676 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 MRPL3P09001 348 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 TACSTD2P09758 323 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GSTT2P0CG29 244 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GSTT2BP0CG30 244 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ELK1P19419 428 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SLC2A5P22732 501 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SHC1P29353 583 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 NR4A2P43354 598 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 FASLGP48023 281 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 PGDP52209 483 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 NKX2-5P52952 324 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SIRPAP78324 504 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 IGLV3-21P80748 117 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 C1orf61Q13536 156 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 IL10RAQ13651 578 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 TATDN3Q17R31 274 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM31Q5JXX7 168 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF362Q5T0B9 420 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SLC6A19Q695T7 634 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 VASNQ6EMK4 673 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 PXKQ7Z7A4 578 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 CYB561A3Q8NBI2 242 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SMRP1Q8NCR6 262 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 THAP4Q8WY91 577 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GHSRQ92847 366 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 MMABQ96EY8 250 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ST6GAL2Q96JF0 529 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 MARVELD1Q9BSK0 173 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 THAP7Q9BT49 309 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 HCAR1Q9BXC0 346 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 RNF32Q9H0A6 362 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 OR10A5Q9H207 317 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 TP63Q9H3D4 680 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 TCEAL2Q9H3H9 227 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 MCCC2Q9HCC0 563 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 PDE7BQ9NP56 450 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 AKAP7Q9P0M2 348 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 HCN3Q9P1Z3 774 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 COPZ2Q9P299 210 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ICAM5Q9UMF0 924 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 IER3IP1Q9Y5U9 82 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 TRBV2A0A0J9YWF9 115 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ZC3H12DA2A288 527 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 NOTOA8MTQ0 251 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 CENPBD1B2RD01 187 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SCDO00767 359 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 PDCD5O14737 125 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 OGG1O15527 345 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 FLRT2O43155 660 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 CHRNB1P11230 501 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 HIST1H1CP16403 213 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ERP29P30040 261 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ACVR1BP36896 505 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GPR3P46089 330 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 CAPZBP47756 277 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms