RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ASCL3Q9NQ33 180 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 MED11Q9P086 117 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 GPR52Q9Y2T5 361 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 SLC6A5Q9Y345 797 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 CEPT1Q9Y6K0 416 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 AHCTF1Q8WYP5 2266 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 PCNX3Q9H6A9 2034 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 NAV2Q8IVL1 2488 aa10.94□□□□□ -0.66
CCBE1-203ENST00000589116 SMG1Q96Q15 3661 aaKnown RBP10.94□□□□□ -0.66
CCBE1-203ENST00000589116 CPAMD8Q8IZJ3 1885 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 TMEM72A0PK05 275 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 C2orf72A6NCS6 295 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 CCDC160A6NGH7 325 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 B4DXG7 233 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 ARPC3O15145 178 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 ZNF208O43345 1280 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 IDH3BO43837 385 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 OR2T1O43869 369 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 BGLAPP02818 100 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 STSP08842 583 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 TSPAN19P0C672 248 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 APEHP13798 732 aaKnown RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 ZNF3P17036 446 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 HK1P19367 917 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 NOS3P29474 1203 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 C21orf33P30042 268 aaPredicted RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 CDH11P55287 796 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 RAB40BQ12829 278 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 TMED1Q13445 227 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 IRF3Q14653 427 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 ACER2Q5QJU3 275 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 FAM69AQ5T7M9 428 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 SYT6Q5T7P8 510 aaPredicted RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 UBE2UQ5VVX9 321 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 RNLSQ5VYX0 342 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 SLC22A10Q63ZE4 541 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 OR5M10Q6IEU7 315 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 CXXC5Q7LFL8 322 aaKnown RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 NANOGNBQ7Z5D8 188 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 LRRC17Q8N6Y2 441 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 OR4K17Q8NGC6 315 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 TAAR8Q969N4 342 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 CRELD1Q96HD1 420 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 TMEM80Q96HE8 168 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 FER1L6-AS2Q96M78 137 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 MOGAT1Q96PD6 335 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 LHPPQ9H008 270 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 CCDC86Q9H6F5 360 aaKnown RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 HINT3Q9NQE9 182 aaKnown RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 H2AFY2Q9P0M6 372 aaPredicted RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 CHRNA9Q9UGM1 479 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 RSL24D1Q9UHA3 163 aaKnown RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 TEKT2Q9UIF3 430 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 KLHL21Q9UJP4 597 aa10.93□□□□□ -0.66
CCBE1-203ENST00000589116 MRPS18BQ9Y676 258 aaKnown RBP10.93□□□□□ -0.66
CCBE1-203ENST00000589116 A0A087WZY1 265 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 MCIDASD6RGH6 385 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 LRRN3E7EW58 273 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 SNPHO15079 494 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 SNX4O95219 450 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 AHSA1O95433 338 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 HIST1H2ABP04908 130 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 CCL3P10147 92 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 LIPCP11150 499 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 DCKP27707 260 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 ADH6P28332 368 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 HTR1FP30939 366 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 UQCRC1P31930 480 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 RPL4P36578 427 aaKnown RBP10.92□□□□□ -0.66
CCBE1-203ENST00000589116 MAP2K4P45985 399 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 MLLT10P55197 1068 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 FOXF1Q12946 379 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 AIMP2Q13155 320 aaKnown RBP10.92□□□□□ -0.66
CCBE1-203ENST00000589116 MFSD13AQ14CX5 517 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 PLPPR5Q32ZL2 321 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 DCAF10Q5QP82 559 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 ARMC4Q5T2S8 1044 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 PRAMEF20Q5VT98 475 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 C1orf140Q5VVS0 124 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 POMZP3Q6PJE2 187 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 CCDC81Q6ZN84 652 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 HIST3H2AQ7L7L0 130 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 MAMDC2Q7Z304 686 aaPredicted RBP10.92□□□□□ -0.66
CCBE1-203ENST00000589116 BCDIN3DQ7Z5W3 292 aaKnown RBP10.92□□□□□ -0.66
CCBE1-203ENST00000589116 PLCZ1Q86YW0 608 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 WDSUB1Q8N9V3 476 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 PSMF1Q92530 271 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 HIST1H2ACQ93077 130 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 C1GALT1C1Q96EU7 318 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 THOC3Q96J01 351 aaKnown RBP10.92□□□□□ -0.66
CCBE1-203ENST00000589116 PTDSS2Q9BVG9 487 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 NRIP3Q9NQ35 241 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 IL17BQ9UHF5 180 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 PRR23D1E9PI22 279 aaPredicted RBP10.92□□□□□ -0.66
CCBE1-203ENST00000589116 H3BSA7 217 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 MASP2O00187 686 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 CDK2AP1O14519 115 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 IMPA2O14732 288 aa10.92□□□□□ -0.66
CCBE1-203ENST00000589116 INMTO95050 263 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms