RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 OR7E24Q6IFN5 339 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 C5orf46Q6UWT4 87 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 PRSS57Q6UWY2 283 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 DNAJA4Q8WW22 397 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-208ENST00000588692 IGFBPL1Q8WX77 278 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDX39A-208ENST00000588692 ANKRD27Q96NW4 1050 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 TRIM2Q9C040 744 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 CXorf56Q9H5V9 222 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 ADPRHL2Q9NX46 363 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 TESQ9UGI8 421 aaKnown RBP12.74□□□□□ -0.37
DDX39A-208ENST00000588692 ARID1AO14497 2285 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 ACANP16112 2415 aa12.74□□□□□ -0.37
DDX39A-208ENST00000588692 SETD2Q9BYW2 2564 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-208ENST00000588692 CIB4A0PJX0 185 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 ELOA3DA6NLF2 546 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-208ENST00000588692 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 RAD51DO75771 328 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 AKR7A3O95154 331 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 TROVE2P10155 538 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX39A-208ENST00000588692 PAX1P15863 534 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 NTF4P34130 210 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 NCALDP61601 193 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 BSPH1Q075Z2 132 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 FAPQ12884 760 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 ADRM1Q16186 407 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 ELOA3BQ3SY89 546 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 TMEM225Q6GV28 225 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 C11orf65Q8NCR3 313 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 C1orf162Q8NEQ5 155 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-208ENST00000588692 ELOA3Q8NG57 546 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 MFSD8Q8NHS3 518 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 FBXW5Q969U6 566 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 CGREF1Q99674 301 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 GSX2Q9BZM3 304 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 UPB1Q9UBR1 384 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 SLC13A4Q9UKG4 626 aa12.73□□□□□ -0.37
DDX39A-208ENST00000588692 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-208ENST00000588692 PDLIM1O00151 329 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 CLOCKO15516 846 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 PNMTP11086 282 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 HOXC5Q00444 222 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 TGFBR3Q03167 851 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 NFYCQ13952 458 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 CYP51A1Q16850 503 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 FAM91A1Q658Y4 838 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 GPAT4Q86UL3 456 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ARMC8Q8IUR7 673 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 SLC30A8Q8IWU4 369 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 C17orf78Q8N4C9 275 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 POMGNT2Q8NAT1 580 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 OR52E4Q8NGH9 312 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 TMEM120AQ9BXJ8 343 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 AMBRA1Q9C0C7 1298 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 RASD1Q9Y272 281 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 A0A1B0GWA3 101 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 DPRXA6NFQ7 191 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 OR6C65A6NJZ3 312 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 FTCDNL1E5RQL4 147 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 OR2T1O43869 369 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 FZD7O75084 574 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ITGA5P08648 1049 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 HTR2AP28223 471 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 GTF2E2P29084 291 aaKnown RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 AQP1P29972 269 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 P2RY4P51582 365 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 PCBP3P57721 371 aaKnown RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 RGS8P57771 180 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 EGR4Q05215 589 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 GABRA6Q16445 453 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ZNF672Q499Z4 452 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ALG10BQ5I7T1 473 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 TSPO2Q5TGU0 170 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ULK3Q6PHR2 472 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 AAED1Q7RTV5 226 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ABHD12BQ7Z5M8 362 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 COMTD1Q86VU5 262 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 PTOV1Q86YD1 416 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 LILRB1Q8NHL6 650 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 SLC38A4Q969I6 547 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 PERPQ96FX8 193 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 RADILQ96JH8 1075 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 C18orf12Q96KH6 178 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 MUS81Q96NY9 551 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 PTDSS2Q9BVG9 487 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 RSPO3Q9BXY4 272 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 SLCO5A1Q9H2Y9 848 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 SLC7A10Q9NS82 523 aa12.72□□□□□ -0.37
DDX39A-208ENST00000588692 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-208ENST00000588692 TPST1O60507 370 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 MFN2O95140 757 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 MPGP29372 298 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 PTH2RP49190 550 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 MTPNP58546 118 aa12.71□□□□□ -0.38
DDX39A-208ENST00000588692 RPS4XP62701 263 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms