RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 MSX2P35548 267 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-207ENST00000588542 RPS5P46782 204 aaKnown RBP17.97■□□□□ 0.47
DDX39A-207ENST00000588542 PDK3Q15120 406 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 TMEM99Q8N816 258 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 MFSD8Q8NHS3 518 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 RNF217Q8TC41 542 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 TAAR8Q969N4 342 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 FAM162AQ96A26 154 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF775Q96BV0 537 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-207ENST00000588542 GALNT8Q9NY28 637 aa17.97■□□□□ 0.47
DDX39A-207ENST00000588542 FOXD3Q9UJU5 478 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-207ENST00000588542 ANKHD1Q8IWZ3 2542 aaKnown RBP17.97■□□□□ 0.47
DDX39A-207ENST00000588542 ZNF724A8MTY0 619 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 UBOX5O94941 541 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 AKR7A3O95154 331 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 AHSA1O95433 338 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 PTNP21246 168 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 P2RY4P51582 365 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 SLC16A1P53985 500 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 SNTB1Q13884 538 aaKnown RBP17.96■□□□□ 0.47
DDX39A-207ENST00000588542 SPATS1Q496A3 300 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 TMEM201Q5SNT2 666 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 C5orf46Q6UWT4 87 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 DEF8Q6ZN54 512 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 GDF7Q7Z4P5 450 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 PIGXQ8TBF5 258 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 LZICQ8WZA0 190 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 LRRC46Q96FV0 321 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 SLC41A3Q96GZ6 507 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 HSH2DQ96JZ2 352 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 PRSS27Q9BQR3 290 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 TACO1Q9BSH4 297 aaKnown RBP17.96■□□□□ 0.47
DDX39A-207ENST00000588542 NAA11Q9BSU3 229 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-207ENST00000588542 TMEM43Q9BTV4 400 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 TAPBPLQ9BX59 468 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 AMBRA1Q9C0C7 1298 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 C12orf49Q9H741 205 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 GORASP2Q9H8Y8 452 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 TAS2R1Q9NYW7 299 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 SLC7A7Q9UM01 511 aa17.96■□□□□ 0.47
DDX39A-207ENST00000588542 ITPR2Q14571 2701 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 TRAV36DV7A0A075B6V5 113 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 AQP7P3A6NL99 342 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 COX6B1P14854 86 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 LTBQ06643 244 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 PIN1Q13526 163 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-207ENST00000588542 SLC17A1Q14916 467 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 OTUD3Q5T2D3 398 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-207ENST00000588542 FAM69AQ5T7M9 428 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 SLC25A36Q96CQ1 311 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 ZNF426Q9BUY5 554 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 POLR2J2Q9GZM3 115 aaKnown RBP17.95■□□□□ 0.46
DDX39A-207ENST00000588542 POLR2J3Q9H1A7 115 aaKnown RBP17.95■□□□□ 0.46
DDX39A-207ENST00000588542 DCAF13Q9NV06 445 aaKnown RBP17.95■□□□□ 0.46
DDX39A-207ENST00000588542 SNX13Q9Y5W8 968 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 CACNA1DQ01668 2161 aa17.95■□□□□ 0.46
DDX39A-207ENST00000588542 HNRNPRO43390 633 aaKnown RBP17.94■□□□□ 0.46
DDX39A-207ENST00000588542 OR2T1O43869 369 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 OR5F1O95221 314 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 BGLAPP02818 100 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 EDNRAP25101 427 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 NTF4P34130 210 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 FAM27E3Q08E93 113 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 IFI44LQ53G44 452 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 TFAP2EQ6VUC0 442 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 OR6S1Q8NH40 331 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 GEMIN6Q8WXD5 167 aaKnown RBP17.94■□□□□ 0.46
DDX39A-207ENST00000588542 MARVELD3Q96A59 401 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 MPP4Q96JB8 637 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 C1orf21Q9H246 121 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 SEC14L4Q9UDX3 406 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 MAGEL2Q9UJ55 1249 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 RIMS3Q9UJD0 308 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 RPS6KA6Q9UK32 745 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 A4GNTQ9UNA3 340 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 FBN2P35556 2912 aa17.94■□□□□ 0.46
DDX39A-207ENST00000588542 ARPC2O15144 300 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 CD79BP40259 229 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 PCYT1AP49585 367 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 TAS2R41P59536 307 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 SORDQ00796 357 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 TSEN54Q7Z6J9 526 aaKnown RBP17.93■□□□□ 0.46
DDX39A-207ENST00000588542 NKAIN4Q8IVV8 208 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 ZNF295-AS1Q8N0V1 137 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 FAM86B1Q8N7N1 296 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 FLVCR1Q9Y5Y0 555 aa17.93■□□□□ 0.46
DDX39A-207ENST00000588542 APCP25054 2843 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 CYSRT1A8MQ03 144 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 LRRN3E7EW58 273 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 J3KTA2 159 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 GMNNO75496 209 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 IFNW1P05000 195 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 FUT4P22083 530 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 CBLP22681 906 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 GRPRP30550 384 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 OR3A2P47893 321 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 EXOC3L2Q2M3D2 409 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 TTC33Q6PID6 262 aaPredicted RBP17.92■□□□□ 0.46
DDX39A-207ENST00000588542 FKBP9P1Q75LS8 142 aa17.92■□□□□ 0.46
DDX39A-207ENST00000588542 GALNT5Q7Z7M9 940 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms