RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SF3B5Q9BWJ5 86 aaKnown RBP13.22□□□□□ -0.29
IFT20-216ENST00000588477 TPK1Q9H3S4 243 aa13.22□□□□□ -0.29
IFT20-216ENST00000588477 NARFLQ9H6Q4 476 aa13.22□□□□□ -0.29
IFT20-216ENST00000588477 ZNF442Q9H7R0 627 aa13.22□□□□□ -0.29
IFT20-216ENST00000588477 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
IFT20-216ENST00000588477 DYNLRB1Q9NP97 96 aa13.22□□□□□ -0.29
IFT20-216ENST00000588477 HIF1ANQ9NWT6 349 aa13.22□□□□□ -0.29
IFT20-216ENST00000588477 MGAM2Q2M2H8 2515 aa13.22□□□□□ -0.29
IFT20-216ENST00000588477 ARPC4-TTLL3A0A0A6YYG9 625 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 RNF103-CHMP3A0A140T963 221 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 ZNF587BE7ETH6 402 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 TRIM77I1YAP6 450 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 IGLV1-44P01699 117 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 CHRNGP07510 517 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 FGF4P08620 206 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 IGFBP1P08833 259 aaPredicted RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 CELA3BP08861 270 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 ADRA2AP08913 450 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 CREB1P16220 341 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 TACR3P29371 465 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 SELENOPP49908 381 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 POLR2HP52434 150 aaKnown RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 PLAURQ03405 335 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 SCGB2A2Q13296 93 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 CEACAM7Q14002 265 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 PGS1Q32NB8 556 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 FAM153CQ494X1 144 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 ATP6AP1LQ52LC2 224 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 IL23RQ5VWK5 629 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 TMEM225Q6GV28 225 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 SHQ1Q6PI26 577 aaKnown RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 TRMT10CQ7L0Y3 403 aaKnown RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 LINGO2Q7L985 606 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 MYPOPQ86VE0 399 aaPredicted RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 RIMKLAQ8IXN7 391 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 CDK20Q8IZL9 346 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 CKAP2Q8WWK9 683 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 RAB8BQ92930 207 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 TMEM186Q96B77 213 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 ANKRD27Q96NW4 1050 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 ALKBH3Q96Q83 286 aaPredicted RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 EXOSC3Q9NQT5 275 aaKnown RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.29
IFT20-216ENST00000588477 SPEF1Q9Y4P9 236 aa13.21□□□□□ -0.29
IFT20-216ENST00000588477 GPIP06744 558 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 PRPS1L1P21108 318 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 CRHR1P34998 444 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 KHKP50053 298 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 HILS1P60008 231 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 IL1RL1Q01638 556 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 PCLAFQ15004 111 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 OR7A5Q15622 319 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 C6orf136Q5SQH8 315 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 ATAD3BQ5T9A4 648 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 AP1ARQ63HQ0 302 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 TNFAIP8L2Q6P589 184 aaPredicted RBP13.2□□□□□ -0.3
IFT20-216ENST00000588477 FRRS1Q6ZNA5 592 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 FNDC5Q8NAU1 212 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 CLDND2Q8NHS1 167 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 AGR3Q8TD06 166 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 OIT3Q8WWZ8 545 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 ROPN1LQ96C74 230 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 C3orf30Q96M34 536 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 NELFAQ9H3P2 528 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 GRIP1Q9Y3R0 1128 aa13.2□□□□□ -0.3
IFT20-216ENST00000588477 WNK2Q9Y3S1 2297 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 OR6C65A6NJZ3 312 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 AQP7P3A6NL99 342 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 TRIM13O60858 407 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 SCN2BO60939 215 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 AGR2O95994 175 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 IGKV3-15P01624 115 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 GUSBP08236 651 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 FUT5Q11128 374 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 GPAT3Q53EU6 434 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 XKR7Q5GH72 579 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 OR4F3Q6IEY1 312 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 NIPAL3Q6P499 406 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 CARM1Q86X55 608 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 HOMEZQ8IX15 550 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 MAGEE2Q8TD90 523 aaPredicted RBP13.19□□□□□ -0.3
IFT20-216ENST00000588477 RBM4Q9BWF3 364 aaKnown RBP13.19□□□□□ -0.3
IFT20-216ENST00000588477 PIF1Q9H611 641 aa13.19□□□□□ -0.3
IFT20-216ENST00000588477 IGHV2OR16-5A0A0B4J2B6 119 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 LIPT2A6NK58 231 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 COPEO14579 308 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 UPK3AO75631 287 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 MSMBP08118 114 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 COL8A2P25067 703 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 GPR6P46095 362 aaPredicted RBP13.18□□□□□ -0.3
IFT20-216ENST00000588477 MAP2K6P52564 334 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 ELFN2Q5R3F8 820 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 FAHD2BQ6P2I3 314 aaPredicted RBP13.18□□□□□ -0.3
IFT20-216ENST00000588477 USP43Q70EL4 1123 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 CREB3L2Q70SY1 520 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms