RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 Q6ZS92 163 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 RBMXL3Q8N7X1 1067 aaKnown RBP10.18□□□□□ -0.78
VMP1-207ENST00000588131 MOSPD2Q8NHP6 518 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 TEX47Q8TBZ9 253 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLC25A43Q8WUT9 341 aaPredicted RBP10.18□□□□□ -0.78
VMP1-207ENST00000588131 SMPDL3BQ92485 455 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 UBE2FQ969M7 185 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLC25A36Q96CQ1 311 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 ABHD17AQ96GS6 310 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 HRASLS5Q96KN8 279 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SFXN2Q96NB2 322 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 PIGQQ9BRB3 760 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 TSSK6Q9BXA6 273 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 POTEKPQ9BYX7 375 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLC6A15Q9H2J7 730 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 ADNPQ9H2P0 1102 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 FKRPQ9H9S5 495 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLC25A19Q9HC21 320 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 NANSQ9NR45 359 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 AASSQ9UDR5 926 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 ZNF229Q9UJW7 825 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLC6A5Q9Y345 797 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SPIN1Q9Y657 262 aaPredicted RBP10.18□□□□□ -0.78
VMP1-207ENST00000588131 MPDZO75970 2070 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 LIPT2A6NK58 231 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 FZD7O75084 574 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 RCBTB2O95199 551 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 MT-ATP6P00846 226 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 GRPRP30550 384 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 AQP2P41181 271 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 GIPRP48546 466 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 STARP49675 285 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 TPD52P55327 224 aaPredicted RBP10.17□□□□□ -0.78
VMP1-207ENST00000588131 GFRA1P56159 465 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 CDK5Q00535 292 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 IL18R1Q13478 541 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 PDK3Q15120 406 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 OR7A5Q15622 319 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 CTU2Q2VPK5 515 aaKnown RBP10.17□□□□□ -0.78
VMP1-207ENST00000588131 LINC00303Q3SY05 128 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 TMEM176BQ3YBM2 270 aaPredicted RBP10.17□□□□□ -0.78
VMP1-207ENST00000588131 TRILQ7L0X0 811 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 MAMDC2Q7Z304 686 aaPredicted RBP10.17□□□□□ -0.78
VMP1-207ENST00000588131 IGFN1Q86VF2 1251 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 SLC22A16Q86VW1 577 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 C8orf59Q8N0T1 100 aaPredicted RBP10.17□□□□□ -0.78
VMP1-207ENST00000588131 FAM109AQ8N4B1 249 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 LRRC75AQ8NAA5 344 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 OR6S1Q8NH40 331 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 MFSD8Q8NHS3 518 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 FAM81AQ8TBF8 368 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 OSTF1Q92882 214 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 OR5B2Q96R09 309 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 ZNF226Q9NYT6 803 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 RNF6Q9Y252 685 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 TP53TG5Q9Y2B4 290 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 HIF3AQ9Y2N7 669 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 PCDHGB7Q9Y5F8 929 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 LIPGQ9Y5X9 500 aa10.17□□□□□ -0.78
VMP1-207ENST00000588131 MCIDASD6RGH6 385 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 H0YC42 278 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 M0R082 166 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 ACOT7O00154 380 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 BHLHE40O14503 412 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 OR2T1O43869 369 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 NDUFB2O95178 105 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 PPP1R3DO95685 299 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 ITGB2P05107 769 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 TSPAN19P0C672 248 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 BMP7P18075 431 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 KLK2P20151 261 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 SLC6A6P31641 620 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 UQCRC1P31930 480 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 CLK1P49759 484 aaKnown RBP10.16□□□□□ -0.78
VMP1-207ENST00000588131 MLLT10P55197 1068 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 CLDN20P56880 219 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 ISL1P61371 349 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 RAC1P63000 192 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 IL5RAQ01344 420 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 RPL18Q07020 188 aaKnown RBP10.16□□□□□ -0.78
VMP1-207ENST00000588131 CD47Q08722 323 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 PGGHGQ32M88 737 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 RPL13AP3Q6NVV1 102 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 SLC27A4Q6P1M0 643 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 UGT2A3Q6UWM9 527 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 NANOGNBQ7Z5D8 188 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 THAP5Q7Z6K1 395 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 GGNQ86UU5 652 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 ENTHD1Q8IYW4 607 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 FAM98AQ8NCA5 519 aaKnown RBP10.16□□□□□ -0.78
VMP1-207ENST00000588131 OR5J2Q8NH18 312 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 ZNF417Q8TAU3 575 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 DTNBP1Q96EV8 351 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 ZNF587Q96SQ5 575 aaPredicted RBP10.16□□□□□ -0.78
VMP1-207ENST00000588131 APOL4Q9BPW4 351 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 TAPBPLQ9BX59 468 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 DEFB127Q9H1M4 99 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 QPCTLQ9NXS2 382 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 ALKBH4Q9NXW9 302 aa10.16□□□□□ -0.78
VMP1-207ENST00000588131 MRPL39Q9NYK5 338 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms