RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 LGI1O95970 557 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 DBIP07108 87 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 CXCR1P25024 350 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 MPGP29372 298 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 SELENOPP49908 381 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 P2RY4P51582 365 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 WDR4P57081 412 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 TNFAIP8L3Q5GJ75 292 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 NXNQ6DKJ4 435 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 LINGO2Q7L985 606 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 PEX5LQ8IYB4 626 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 DEPDC4Q8N2C3 294 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 ARIH2OSQ8N7S6 290 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 C1orf162Q8NEQ5 155 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 OR52P1PQ8NH57 321 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 C10orf105Q8TEF2 133 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 FAM168AQ92567 244 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 PMM1Q92871 262 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 VPS33AQ96AX1 596 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 MTHFD2LQ9H903 347 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 ZNF443Q9Y2A4 671 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 AMDHD2Q9Y303 409 aa13.27□□□□□ -0.29
PRKCSH-204ENST00000587290 IGHV1-18A0A0C4DH31 117 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 CDHR4A6H8M9 788 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 AQP7P3A6NL99 342 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 ELOA3DA6NLF2 546 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 NR5A2O00482 541 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 FAAHO00519 579 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 GPIP06744 558 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 IGHV4-31P0DP07 118 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 FKBP2P26885 142 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 CRATP43155 626 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 HOXC5Q00444 222 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 SRSF2Q01130 221 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 GNA13Q14344 377 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 MST1LQ2TV78 715 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 ELOA3BQ3SY89 546 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC9B1Q4ZJI4 515 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 HHATQ5VTY9 493 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 ZNF544Q6NX49 715 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 PODNL1Q6PEZ8 512 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 IL17RELQ6ZVW7 336 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 MAVSQ7Z434 540 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 SPATA19Q7Z5L4 167 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 SERPINA11Q86U17 422 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 LRRC34Q8IZ02 419 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 KDM8Q8N371 416 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 C17orf78Q8N4C9 275 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 ANKS4BQ8N8V4 417 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 ELOA3Q8NG57 546 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 OR9I1Q8NGQ6 314 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 TMEM45BQ96B21 275 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 SORCS2Q96PQ0 1159 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 ZBTB18Q99592 522 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 FKRPQ9H9S5 495 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 PARPBPQ9NWS1 579 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 DSPPQ9NZW4 1301 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 P2RX2Q9UBL9 471 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 SEC14L4Q9UDX3 406 aa13.26□□□□□ -0.29
PRKCSH-204ENST00000587290 A0A096LPE4 126 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 A0A1W2PPZ6 126 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 HDAC3O15379 428 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 NUDT7P0C024 238 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 UQCRBP14927 111 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 APOBEC3AP31941 199 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 ANXA11P50995 505 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 PRPS1P60891 318 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 VLDLRP98155 873 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 LOXL1Q08397 574 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 LIN52Q52LA3 116 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 ATG16L1Q676U5 607 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 VHLLQ6RSH7 139 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 KLHL24Q6TFL4 600 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 MYPOPQ86VE0 399 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC38A5Q8WUX1 472 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 C3orf49Q96BT1 292 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 TMEM19Q96HH6 336 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 KCNK17Q96T54 332 aa13.25□□□□□ -0.29
PRKCSH-204ENST00000587290 TMEM120BA0PK00 339 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 PHF1O43189 567 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 SNNO75324 88 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 UPK3AO75631 287 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 KRT33AO76009 404 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 SNUPNO95149 360 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 KRT75O95678 551 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 TFPTP0C1Z6 253 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC25A16P16260 332 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 NCF2P19878 526 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 EFNA4P52798 201 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 DSTNP60981 165 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 GGTLC2Q14390 218 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 CARTPTQ16568 116 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 TBRG1Q3YBR2 411 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 C1orf140Q5VVS0 124 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 PRAMEF8Q5VWM4 474 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 PRAMEF7Q5VXH5 474 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 TMEM225Q6GV28 225 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 WBP2NLQ6ICG8 309 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms