RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 OR9Q2Q8NGE9 314 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 OR5J2Q8NH18 312 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 TEX47Q8TBZ9 253 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
TRIM47-202ENST00000585333 FAM46AQ96IP4 442 aaKnown RBP11.64□□□□□ -0.55
TRIM47-202ENST00000585333 PRDM14Q9GZV8 571 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 Q9H521 79 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 MEPEQ9NQ76 525 aaPredicted RBP11.64□□□□□ -0.55
TRIM47-202ENST00000585333 SMPD3Q9NY59 655 aaPredicted RBP11.64□□□□□ -0.55
TRIM47-202ENST00000585333 RASD1Q9Y272 281 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 SLC6A5Q9Y345 797 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF175Q9Y473 711 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 FAM208BQ5VWN6 2430 aa11.64□□□□□ -0.55
TRIM47-202ENST00000585333 CACNA1GO43497 2377 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 EML6Q6ZMW3 1958 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 AHRRA9YTQ3 701 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 WDR1O75083 606 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 NDUFB2O95178 105 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 CH25HO95992 272 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 GASTP01350 101 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 OSMP13725 252 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 ENPP1P22413 925 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 PEX2P28328 305 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 SLC6A6P31641 620 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 PTGS2P35354 604 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 CASP6P55212 293 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 PMS2P3Q13401 168 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 OR7A5Q15622 319 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF239Q16600 458 aaKnown RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 EIF2S3LQ2VIR3 472 aaKnown RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 ZBED5Q49AG3 693 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 RNFT1Q5M7Z0 435 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 FBXW10Q5XX13 1052 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF324BQ6AW86 544 aaPredicted RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 SMARCD3Q6STE5 483 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 H1FNTQ75WM6 255 aaPredicted RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 EPHX4Q8IUS5 362 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 CISD2Q8N5K1 135 aaKnown RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 Q8NA96 180 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF555Q8NEP9 628 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 OR5M1Q8NGP8 315 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 PFN4Q8NHR9 129 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 FANK1Q8TC84 345 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 ZPLD1Q8TCW7 415 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 TAAR8Q969N4 342 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 GTPBP3Q969Y2 492 aaKnown RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 SLC25A36Q96CQ1 311 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 KTI12Q96EK9 354 aaPredicted RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 TIMP4Q99727 224 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 SLX1AQ9BQ83 275 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 SF3B5Q9BWJ5 86 aaKnown RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 OR11A1Q9GZK7 315 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 TMEM185BQ9H7F4 350 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 GP6Q9HCN6 339 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 CHST11Q9NPF2 352 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 NKX1-2Q9UD57 310 aaPredicted RBP11.63□□□□□ -0.55
TRIM47-202ENST00000585333 HIF3AQ9Y2N7 669 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 CDH10Q9Y6N8 788 aa11.63□□□□□ -0.55
TRIM47-202ENST00000585333 LOC102725191A0A1B0GVB3 256 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 NPIPB13A6NJU9 1138 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 SHISA8B8ZZ34 492 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 NPIPB4C9JG80 1138 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 H3BN98 237 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 GPR171O14626 319 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 PRRG2O14669 202 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 KLF4O43474 513 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 IDH3BO43837 385 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 BGLAPP02818 100 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 CELA3AP09093 270 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 ASAH2BP0C7U1 165 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 NR2C1P13056 603 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 APEHP13798 732 aaKnown RBP11.62□□□□□ -0.55
TRIM47-202ENST00000585333 ABOP16442 354 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 GPR4P46093 362 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 EIF1AXP47813 144 aaKnown RBP11.62□□□□□ -0.55
TRIM47-202ENST00000585333 AGFG1P52594 562 aaKnown RBP11.62□□□□□ -0.55
TRIM47-202ENST00000585333 CLDN18P56856 261 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 PUDPQ08623 228 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 PPP1R8Q12972 351 aaKnown RBP11.62□□□□□ -0.55
TRIM47-202ENST00000585333 RNPS1Q15287 305 aaKnown RBP11.62□□□□□ -0.55
TRIM47-202ENST00000585333 LRRC36Q1X8D7 754 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 TTC23Q5W5X9 447 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 FAM205BPQ63HN1 556 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 TBPL2Q6SJ96 375 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF620Q6ZNG0 422 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 PRICKLE2Q7Z3G6 844 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 TMEM179BQ7Z7N9 219 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 GGNQ86UU5 652 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 UBQLNLQ8IYU4 475 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 ANKK1Q8NFD2 765 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 OR10D3Q8NH80 312 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 ARL5BQ96KC2 179 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 BARD1Q99728 777 aaKnown RBP11.62□□□□□ -0.55
TRIM47-202ENST00000585333 KLHDC3Q9BQ90 382 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 PTDSS2Q9BVG9 487 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 PRRG4Q9BZD6 226 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 COQ10BQ9H8M1 238 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 GLRX2Q9NS18 164 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 IL20Q9NYY1 176 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms