RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 ARHGAP32A7KAX9 2087 aa12.15□□□□□ -0.46
CSNK1D-224ENST00000584672 TMED7-TICAM2A0A0A6YYA0 188 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 ARPC4-TTLL3A0A0A6YYG9 625 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 A0A0G2JMP0 313 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 A0A0X1KG70 313 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 ZNF503-AS2A6NEH8 195 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 AP3D1O14617 1153 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 PLPP2O43688 288 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 SYNGR3O43761 229 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 EIF1BO60739 113 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 NCR1O76036 304 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 PGM1P36871 562 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 IDH2P48735 452 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 RFTN2Q52LD8 501 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 EMBQ6PCB8 327 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 LRP11Q86VZ4 500 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 CLEC4FQ8N1N0 589 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 RIBC1Q8N443 379 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 OR4M2Q8NGB6 313 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 NANPQ8TBE9 248 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 ZNF665Q9H7R5 613 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 CRLF2Q9HC73 371 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 SLC52A3Q9NQ40 469 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 MED29Q9NX70 200 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 TRAPPC4Q9Y296 219 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 TMED7Q9Y3B3 224 aa12.14□□□□□ -0.47
CSNK1D-224ENST00000584672 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 CLDN24A6NM45 220 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 PIP5K1BO14986 540 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 SCAMP2O15127 329 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 CFLARO15519 480 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 STX11O75558 287 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 UPK3AO75631 287 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 SEC14L2O76054 403 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 IGKV3-15P01624 115 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 SNRPAP09012 282 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 BCKDHAP12694 445 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 HPCAL1P37235 193 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 CAPZA2P47755 286 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 CLK1P49759 484 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 OR7A5Q15622 319 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 ALKBH6Q3KRA9 238 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 SLC9B1Q4ZJI4 515 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 ACSM5Q6NUN0 579 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 NIPAL3Q6P499 406 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 PAQR6Q6TCH4 344 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 RBMS3Q6XE24 437 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 GSPT2Q8IYD1 628 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 FAM71CQ8NEG0 241 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 DDIT4LQ96D03 193 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 FCRL1Q96LA6 429 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 ZDHHC18Q9NUE0 388 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 OXSMQ9NWU1 459 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 MYEF2Q9P2K5 600 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 GIMAP2Q9UG22 337 aa12.13□□□□□ -0.47
CSNK1D-224ENST00000584672 SLC28A1O00337 649 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 CDC14BO60729 498 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 LINC00032P0C843 101 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 UROSP10746 265 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 NAT2P11245 290 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 CBR1P16152 277 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 PRPH2P23942 346 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 FPR2P25090 351 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 ARF1P84077 181 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 ROR2Q01974 943 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 PLAURQ03405 335 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 SRSF4Q08170 494 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 CEACAM7Q14002 265 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 C16orf62Q7Z3J2 963 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 R3HCC1LQ7Z5L2 792 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 MDP1Q86V88 176 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 KIF18AQ8NI77 898 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 MTERF3Q96E29 417 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 NTN4Q9HB63 628 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 OSGIN1Q9UJX0 560 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 PCDHGB4Q9UN71 923 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 WNK1Q9H4A3 2382 aa12.12□□□□□ -0.47
CSNK1D-224ENST00000584672 SCN2BO60939 215 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 RP2O75695 350 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 ANPEPP15144 967 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 MDKP21741 143 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 MATN1P21941 496 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 PRTN3P24158 256 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 TACR3P29371 465 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 POLR2HP52434 150 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 TMEM33P57088 247 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 FAM153CQ494X1 144 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 C1QL4Q86Z23 238 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 SFXN5Q8TD22 340 aa12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 MAGEE2Q8TD90 523 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 CNOT9Q92600 299 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-224ENST00000584672 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms