RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 LRFN4Q6PJG9 635 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 LRRN1Q6UXK5 716 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 CCDC80Q76M96 950 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 CEACAM19Q7Z692 300 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 YRDCQ86U90 279 aaKnown RBP9.39□□□□□ -0.91
RFFL-212ENST00000584655 OR5J2Q8NH18 312 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 NEIL3Q8TAT5 605 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 PTP4A1Q93096 173 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 OPALINQ96PE5 141 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 PRSS27Q9BQR3 290 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 UBQLN4Q9NRR5 601 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 ING3Q9NXR8 418 aa9.39□□□□□ -0.91
RFFL-212ENST00000584655 TAF4O00268 1085 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 XKRYO14609 159 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 ASNA1O43681 348 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 MAS1P04201 325 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 ZNF3P17036 446 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 PRKAR1BP31321 381 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 SOX6P35712 828 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 FRKP42685 505 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 DNASE1L1P49184 302 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 SLC37A1P57057 533 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 DCDP81605 110 aaKnown RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 POU3F1Q03052 451 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 ZNF404Q494X3 552 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 HES5Q5TA89 166 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 SLX4IPQ5VYV7 408 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 OR7E24Q6IFN5 339 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 CADM4Q8NFZ8 388 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 C1orf216Q8TAB5 229 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 ZNF501Q96CX3 271 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 SPACA5Q96QH8 159 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 PITHD1Q9GZP4 211 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 WDR76Q9H967 626 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 ZMAT3Q9HA38 289 aaKnown RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 ACOXLQ9NUZ1 547 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 PCDHGA3Q9Y5H0 932 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 LOC100509620A0A075B734 347 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 GSTT2BP0CG30 244 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 GP1BBP13224 206 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 NRG3P56975 720 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 DSG2Q14126 1118 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 TMEM176BQ3YBM2 270 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 VASNQ6EMK4 673 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 LUZP2Q86TE4 346 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 POMGNT2Q8NAT1 580 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 TMEM163Q8TC26 289 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 APOBEC4Q8WW27 367 aaKnown RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 GABARAPL3Q9BY60 117 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 KCNK15Q9H427 330 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 HRH3Q9Y5N1 445 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 CDH10Q9Y6N8 788 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 LNP1A1A4G5 178 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 OR6C68A6NDL8 312 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 TRIM3O75382 744 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 SLC1A3P43003 542 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 C21orf58P58505 322 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 FABP5Q01469 135 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 PON3Q15166 354 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 ARMC4Q5T2S8 1044 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 PMS2CLQ68D20 193 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 ACBD7Q8N6N7 88 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 YIPF7Q8N8F6 280 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 TAAR8Q969N4 342 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 FKBP10Q96AY3 582 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 MOAP1Q96BY2 351 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 CDCP1Q9H5V8 836 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 BCL2L10Q9HD36 194 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 PRDM9Q9NQV7 894 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 TUBA8Q9NY65 449 aaPredicted RBP9.38□□□□□ -0.91
RFFL-212ENST00000584655 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
RFFL-212ENST00000584655 SNPHO15079 494 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 TSC22D2O75157 780 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 PRKCAP17252 672 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 CCNOP22674 350 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 CDAP32320 146 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 FXYD6P3P58550 94 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 SRSF6Q13247 344 aaKnown RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 ANGPT1Q15389 498 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 NATD1Q8N6N6 113 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 OR4K17Q8NGC6 315 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ZNF417Q8TAU3 575 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 UFD1Q92890 307 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ZNF587Q96SQ5 575 aaPredicted RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 G6PC3Q9BUM1 346 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 KRCC1Q9NPI7 259 aaPredicted RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 LANCL2Q9NS86 450 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 PPP4R1LQ9P1A2 415 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 NPFFR2Q9Y5X5 522 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 SLC30A4O14863 429 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 HPGDSO60760 199 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 RCBTB2O95199 551 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 CSN2P05814 226 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ACAA2P42765 397 aaKnown RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 RNF4P78317 190 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 TMEM71Q6P5X7 295 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 RBM12BQ8IXT5 1001 aaKnown RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 SAP25Q8TEE9 199 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms