RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PVRIGQ6DKI7 326 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 WDR74Q6RFH5 385 aaPredicted RBP2.19□□□□□ -2.06
COPS3-217ENST00000583160 CCDC170Q8IYT3 715 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 KIR2DL5AQ8N109 375 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 LYPD1Q8N2G4 141 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 SLC25A36Q96CQ1 311 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 TMEM121Q9BTD3 319 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 TBC1D10AQ9BXI6 508 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 PLA2G2FQ9BZM2 168 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 PHF11Q9UIL8 331 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 EIF3LQ9Y262 564 aaKnown RBP2.19□□□□□ -2.06
COPS3-217ENST00000583160 MTCH2Q9Y6C9 303 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 LOXHD1Q8IVV2 1947 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 FRMPD4Q14CM0 1322 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 TECTAO75443 2155 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 BAZ2BQ9UIF8 2168 aaKnown RBP2.18□□□□□ -2.06
COPS3-217ENST00000583160 LOC100131303A0A0U1RQF7 123 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 SERPINE3A8MV23 424 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 RIPK2O43353 540 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 MED6O75586 246 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 GOSR1O95249 250 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 CD5P06127 495 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 ZCCHC18P0CG32 403 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 BCKDHAP12694 445 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 TSPAN8P19075 237 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 MX1P20591 662 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 PTPN6P29350 595 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 DLSTP36957 453 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 CCR6P51684 374 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 ST3GAL3Q11203 375 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 TFDP1Q14186 410 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 GGTLC2Q14390 218 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 TMEM52BQ4KMG9 183 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 IL23RQ5VWK5 629 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 FAM159AQ6UWV7 190 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 UNQ9370/PRO34162Q6UXP9 181 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 CYS1Q717R9 158 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 VPS36Q86VN1 386 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 PPTC7Q8NI37 304 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 MTG1Q9BT17 334 aaPredicted RBP2.18□□□□□ -2.06
COPS3-217ENST00000583160 RNF126Q9BV68 326 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 NFKBIZQ9BYH8 718 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 COMMD4Q9H0A8 199 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 BTNL2Q9UIR0 455 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 PLA2G4CQ9UP65 541 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 TDRKHQ9Y2W6 561 aaKnown RBP2.18□□□□□ -2.06
COPS3-217ENST00000583160 MYO7AQ13402 2215 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 MUC6Q6W4X9 2439 aa2.18□□□□□ -2.06
COPS3-217ENST00000583160 ABCB11O95342 1321 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 FANCMQ8IYD8 2048 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 MBLAC1A4D2B0 266 aaPredicted RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 ZNF705EA8MWA4 302 aaPredicted RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 E9PMD0 336 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 SGK494L7N484 410 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 NDUFA7O95182 113 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 SNAPINO95295 136 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 SLC4A1P02730 911 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 ABHD2P08910 425 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 HSPD1P10809 573 aaKnown RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 H2AFXP16104 143 aaPredicted RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 PRDX3P30048 256 aaKnown RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 CTNNA1P35221 906 aaKnown RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 TDO2P48775 406 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 BEX3Q00994 111 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 TMEM184AQ6ZMB5 413 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 C1orf186Q6ZWK4 172 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 TMEM61Q8N0U2 210 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 ZSCAN4Q8NAM6 433 aaPredicted RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 TOP1MTQ969P6 601 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 SNX21Q969T3 373 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 RNF185Q96GF1 192 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 SPATA13Q96N96 652 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 FOPNLQ96NB1 174 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 TGS1Q96RS0 853 aaKnown RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 SRXN1Q9BYN0 137 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 POLR2J2Q9GZM3 115 aaKnown RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 MAGT1Q9H0U3 335 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 POLR2J3Q9H1A7 115 aaKnown RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 PPDPFQ9H3Y8 114 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 GPN2Q9H9Y4 310 aaPredicted RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 TRPV5Q9NQA5 729 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 PRMT8Q9NR22 394 aaPredicted RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 TRIM10Q9UDY6 481 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 CTNNA3Q9UI47 895 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 TP53TG5Q9Y2B4 290 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 TEX264Q9Y6I9 313 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 KMT2EQ8IZD2 1858 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 DOCK5Q9H7D0 1870 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 MYH9P35579 1960 aaKnown RBP2.17□□□□□ -2.06
COPS3-217ENST00000583160 KIAA1671Q9BY89 1806 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 CCDC171Q6TFL3 1326 aa2.17□□□□□ -2.06
COPS3-217ENST00000583160 WDFY4Q6ZS81 3184 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 C5orf42Q9H799 3197 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 CACNA1HO95180 2353 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 DOCK9Q9BZ29 2069 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 DCHS1Q96JQ0 3298 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 COL1A2P08123 1366 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 TRIOO75962 3097 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 A0A0D9SFI3 127 aa2.16□□□□□ -2.06
COPS3-217ENST00000583160 TRBV2A0A0J9YWF9 115 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms