RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 POMGNT2Q8NAT1 580 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 AGBL5Q8NDL9 886 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 SDR9C7Q8NEX9 313 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 NUBPLQ8TB37 319 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 ADGRL4Q9HBW9 690 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 SMURF1Q9HCE7 757 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 SNTG1Q9NSN8 517 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 BABAM2Q9NXR7 383 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 PPIEQ9UNP9 301 aaKnown RBP20.64■□□□□ 0.9
CCDC47-204ENST00000582252 PCDHGB6Q9Y5F9 930 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 PCDHGA1Q9Y5H4 931 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 CNOT1A5YKK6 2376 aaKnown RBP20.64■□□□□ 0.89
CCDC47-204ENST00000582252 hCG_2014768A0A024R1R8 64 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.64■□□□□ 0.89
CCDC47-204ENST00000582252 ZC3H12DA2A288 527 aaKnown RBP20.64■□□□□ 0.89
CCDC47-204ENST00000582252 NUDT14O95848 222 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 OCM2P0CE71 109 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 OCMP0CE72 109 aaPredicted RBP20.64■□□□□ 0.89
CCDC47-204ENST00000582252 FGF5P12034 268 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 CCKBRP32239 447 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 P2RX1P51575 399 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 ZNF385CQ66K41 422 aaPredicted RBP20.64■□□□□ 0.89
CCDC47-204ENST00000582252 DCDC5Q6ZRR9 648 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 BTLAQ7Z6A9 289 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 CENPSQ8N2Z9 138 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 NFAM1Q8NET5 270 aaPredicted RBP20.64■□□□□ 0.89
CCDC47-204ENST00000582252 OR4K13Q8NH42 304 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 SMPDL3BQ92485 455 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 SLC25A46Q96AG3 418 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 MRPL48Q96GC5 212 aaKnown RBP20.64■□□□□ 0.89
CCDC47-204ENST00000582252 LPAR4Q99677 370 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 SLC26A1Q9H2B4 701 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 MMP25Q9NPA2 562 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 NOX1Q9Y5S8 564 aa20.64■□□□□ 0.89
CCDC47-204ENST00000582252 LRRN3E7EW58 273 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 IMPA2O14732 288 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 PFDN1O60925 122 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 CPNE3O75131 537 aaKnown RBP20.63■□□□□ 0.89
CCDC47-204ENST00000582252 HIST1H2ABP04908 130 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 CD53P19397 219 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 CELP19835 753 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 SLC26A5P58743 744 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 TRAM1Q15629 374 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 ZNF181Q2M3W8 571 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 B3GLCTQ6Y288 498 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 HIST3H2AQ7L7L0 130 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 OR5L2Q8NGL0 311 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 HIST1H2ACQ93077 130 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 FKRPQ9H9S5 495 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 FAIMQ9NVQ4 179 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 WDR70Q9NW82 654 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 GALNT8Q9NY28 637 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 DAPK2Q9UIK4 370 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 ZNF229Q9UJW7 825 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 NPFFR2Q9Y5X5 522 aa20.63■□□□□ 0.89
CCDC47-204ENST00000582252 IQCMA0A1B0GVH7 501 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 ISPDA4D126 451 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 LOC110117498-PIK3R3F6TDL0 507 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 FADS1O60427 444 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 SLC25A12O75746 678 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 LALBAP00709 142 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 ATP1A4Q13733 1029 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 GGTLC2Q14390 218 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 PON3Q15166 354 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 CCDC157Q569K6 752 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 PAPD4Q6PIY7 484 aaKnown RBP20.62■□□□□ 0.89
CCDC47-204ENST00000582252 OR8K3Q8NH51 312 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 AP3S1Q92572 193 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 CNN2Q99439 309 aaKnown RBP20.62■□□□□ 0.89
CCDC47-204ENST00000582252 TBX5Q99593 518 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 KCNS3Q9BQ31 491 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 KATNB1Q9BVA0 655 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 AKAP7Q9P0M2 348 aaPredicted RBP20.62■□□□□ 0.89
CCDC47-204ENST00000582252 NXT1Q9UKK6 140 aaKnown RBP20.62■□□□□ 0.89
CCDC47-204ENST00000582252 POLHQ9Y253 713 aa20.62■□□□□ 0.89
CCDC47-204ENST00000582252 IGHV3-20A0A0C4DH32 117 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 BLOC1S5-TXNDC5H3BN57 136 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 CD14P08571 375 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 MST1P26927 711 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 FABP5Q01469 135 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 IL10RAQ13651 578 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 TRIM16LQ309B1 348 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 ALG10Q5BKT4 473 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 DESI1Q6ICB0 168 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 NANOGNBQ7Z5D8 188 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 CPEB2Q7Z5Q1 589 aaKnown RBP20.61■□□□□ 0.89
CCDC47-204ENST00000582252 GLRX5Q86SX6 157 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 JAZF1Q86VZ6 243 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 ZFP41Q8N8Y5 198 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 APCDD1LQ8NCL9 501 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 TMCO6Q96DC7 493 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 DEPDC7Q96QD5 511 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 TM9SF2Q99805 663 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 CRB3Q9BUF7 120 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 MROQ9BYG7 248 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 KCNN2Q9H2S1 579 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 SCO2O43819 266 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 MRPL3P09001 348 aaKnown RBP20.61■□□□□ 0.89
CCDC47-204ENST00000582252 ASAH2BP0C7U1 165 aa20.61■□□□□ 0.89
CCDC47-204ENST00000582252 CLUP10909 449 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms