RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 MREGQ8N565 214 aa10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 FBXO17Q96EF6 278 aa10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 AURKBQ96GD4 344 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 KCNK17Q96T54 332 aa10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 AMBRA1Q9C0C7 1298 aa10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ADAM19Q9H013 955 aa10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SSU72Q9NP77 194 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 P2RX2Q9UBL9 471 aa10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 GPR45Q9Y5Y3 372 aa10.17□□□□□ -0.78
CDK5RAP3-223ENST00000582114 CDHR4A6H8M9 788 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 H7C417 338 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SNUPNO95149 360 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 LGI1O95970 557 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 IGHV4-31P0DP07 118 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 NCF2P19878 526 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 APOBEC3AP31941 199 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ACAA2P42765 397 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 CRATP43155 626 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SELENOPP49908 381 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 EFNA4P52798 201 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 DSCR9P59020 149 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 PRPS1P60891 318 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 TUBA1BP68363 451 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 TUBA4AP68366 448 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 HOXC5Q00444 222 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 CHRNB3Q05901 458 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 LOXL1Q08397 574 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 LIN52Q52LA3 116 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ZNF544Q6NX49 715 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 VHLLQ6RSH7 139 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 TUBA1AQ71U36 451 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SPATA19Q7Z5L4 167 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 LRRC34Q8IZ02 419 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 CLIP4Q8N3C7 705 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 C17orf78Q8N4C9 275 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 OR52P1PQ8NH57 321 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 C10orf105Q8TEF2 133 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 TMEM45BQ96B21 275 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ALKBH3Q96Q83 286 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 TAPBPLQ9BX59 468 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 PARD6BQ9BYG5 372 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ZNF443Q9Y2A4 671 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 PMF1-BGLAPU3KQ54 211 aa10.16□□□□□ -0.78
CDK5RAP3-223ENST00000582114 A0A096LPE4 126 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 IGHV1-18A0A0C4DH31 117 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 A0A1W2PPZ6 126 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 AQP7P3A6NL99 342 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ELOA3DA6NLF2 546 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 NR5A2O00482 541 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 FAAHO00519 579 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 FRS3O43559 492 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ANP32DO95626 131 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 KRT75O95678 551 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 WNT11O96014 354 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SLC25A16P16260 332 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 MVDP53602 400 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 WDR4P57081 412 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 COPZ1P61923 177 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 VLDLRP98155 873 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 GGTLC2Q14390 218 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 MST1LQ2TV78 715 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ELOA3BQ3SY89 546 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ATG16L1Q676U5 607 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 TMEM225Q6GV28 225 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 WBP2NLQ6ICG8 309 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 NIPAL3Q6P499 406 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 IL17RELQ6ZVW7 336 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 LINGO2Q7L985 606 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SERPINA11Q86U17 422 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ZNF440Q8IYI8 595 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 KIRREL3Q8IZU9 778 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 KDM8Q8N371 416 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ARIH2OSQ8N7S6 290 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ANKS4BQ8N8V4 417 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 POMGNT2Q8NAT1 580 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 ELOA3Q8NG57 546 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 C3orf49Q96BT1 292 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 TMEM19Q96HH6 336 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SORCS2Q96PQ0 1159 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 KCNS3Q9BQ31 491 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 CHODLQ9H9P2 273 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SEC61A2Q9H9S3 476 aa10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 YLPM1P49750 1951 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-223ENST00000582114 SVEP1Q4LDE5 3571 aa10.15□□□□□ -0.79
CDK5RAP3-223ENST00000582114 DSPPQ9NZW4 1301 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 MXRA5Q9NR99 2828 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 A8MVM7 634 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 ZNF587BE7ETH6 402 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 HDAC3O15379 428 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 PHF1O43189 567 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 UPK3AO75631 287 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 SLC22A3O75751 556 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 FAM157CP0CG43 387 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 BMP4P12644 408 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 USF1P22415 310 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 P2RY4P51582 365 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 CRISP3P54108 245 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 DSTNP60981 165 aa10.14□□□□□ -0.79
CDK5RAP3-223ENST00000582114 UBE2NP61088 152 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms