RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 PTHLHP12272 177 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 F8A1P23610 371 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 CCR6P51684 374 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 RAB38P57729 211 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 FOXL2P58012 376 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 KCNAB1Q14722 419 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 ODF4Q2M2E3 257 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 PRSS58Q8IYP2 241 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 PRR22Q8IZ63 422 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 ZNF433Q8N7K0 673 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-209ENST00000580095 ZDHHC1Q8WTX9 485 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 RFT1Q96AA3 541 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 PHF21AQ96BD5 680 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 MMABQ96EY8 250 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-209ENST00000580095 VSTM2LQ96N03 204 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 GSDMCQ9BYG8 508 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 FKRPQ9H9S5 495 aa9.62□□□□□ -0.87
TOP3A-209ENST00000580095 A0A1B0GTH9 108 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CDC14CA4D256 554 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 PRR32B1ATL7 298 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 FOXS1O43638 330 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 HLA-DQB1P01920 261 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 F13BP05160 661 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 HOXC4P09017 264 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CT45A8P0DMV1 189 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CT45A9P0DMV2 189 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 SLC6A6P31641 620 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 PITPNBP48739 271 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 GDI2P50395 445 aaKnown RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 POLR2GP62487 172 aaKnown RBP eCLIP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 SF3A2Q15428 464 aaKnown RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CT45A2Q5DJT8 189 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CBLN3Q6UW01 205 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 TIGD4Q8IY51 512 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 PMM1Q92871 262 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 DACT3Q96B18 629 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 HSPA12BQ96MM6 686 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 FOXN4Q96NZ1 517 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 GDF15Q99988 308 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 LMAN2LQ9H0V9 348 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 POT1Q9NUX5 634 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 ST6GALNAC2Q9UJ37 374 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 TMEM5Q9Y2B1 443 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 MUC3AQ02505 3323 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 A0A0A6YYJ9 748 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 TRBV2A0A0J9YWF9 115 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 SLC19A2O60779 497 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 GPANK1O95872 356 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 YES1P07947 543 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 RAB3BP20337 219 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 EDNRAP25101 427 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 AQP2P41181 271 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 GFERP55789 205 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CLDN20P56880 219 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CD226Q15762 336 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 HES5Q5TA89 166 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 NKAIN2Q5VXU1 208 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 DMKNQ6E0U4 476 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 C19orf47Q8N9M1 422 aaKnown RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 OR10Z1Q8NGY1 313 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 TRIM63Q969Q1 353 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 OMA1Q96E52 524 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 Q96M85 177 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CDCA3Q99618 268 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 NKX3-1Q99801 234 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 NRSN2Q9GZP1 204 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 RPRD1BQ9NQG5 326 aaKnown RBP9.61□□□□□ -0.87
TOP3A-209ENST00000580095 NKIRAS2Q9NYR9 191 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 CHRNA9Q9UGM1 479 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 ADAM30Q9UKF2 790 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 SCML1Q9UN30 329 aa9.61□□□□□ -0.87
TOP3A-209ENST00000580095 WDFY4Q6ZS81 3184 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 SPTY2D1-AS1A0A0U1RR47 76 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 NDUFA2O43678 99 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 SDC3O75056 442 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 WISP1O95388 367 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 MT-ND4P03905 459 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-209ENST00000580095 LRRC28Q86X40 367 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-209ENST00000580095 BCORP1Q8N888 145 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 DUSP18Q8NEJ0 188 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 TTC9Q92623 222 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 MOGAT1Q96PD6 335 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 MARVELD1Q9BSK0 173 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 AUNIPQ9H7T9 357 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ING1Q9UK53 422 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-209ENST00000580095 HSPB11Q9Y547 144 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ENTPD2Q9Y5L3 495 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 TEX13CA0A0J9YWL9 993 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ORC5O43913 435 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 FMO6PO60774 539 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 IFNGP01579 166 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ANKRD34CP0C6C1 535 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 GIFP27352 417 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 BTCP35070 178 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 BDH1Q02338 343 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 FAPQ12884 760 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 FCN2Q15485 313 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 NTRK2Q16620 822 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms