RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 RNF6Q9Y252 685 aa13.91□□□□□ -0.18
SLC6A4-205ENST00000579221 MED31Q9Y3C7 131 aa13.91□□□□□ -0.18
SLC6A4-205ENST00000579221 SMG1Q96Q15 3661 aaKnown RBP13.91□□□□□ -0.18
SLC6A4-205ENST00000579221 A0A1W2PRQ8 180 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 SMAD9O15198 467 aaKnown RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 CYTIPO60759 359 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 ZG16O60844 167 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 AKR7A3O95154 331 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 GADD45GO95257 159 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 MT-ATP6P00846 226 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 LDLRP01130 860 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 IGF2P01344 180 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 BGLAPP02818 100 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 MT-ND1P03886 318 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 HIST1H2ABP04908 130 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 AGAP20933 346 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 PTNP21246 168 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 CHRNB4P30926 498 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 OPRM1P35372 400 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 MAGEA2P43356 314 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 CTBP2P56545 445 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 H3F3AP84243 136 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 SPIBQ01892 262 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 RASGEF1BQ0VAM2 473 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 DGCR6Q14129 220 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 PDK3Q15120 406 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 OTUD3Q5T2D3 398 aaPredicted RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 TMEM225Q6GV28 225 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 ZNF730Q6ZMV8 503 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 HIST3H2AQ7L7L0 130 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 MRGPRGQ86SM5 289 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 CDK20Q8IZL9 346 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 ZNF808Q8N4W9 903 aaPredicted RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 TMEM99Q8N816 258 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 ACOT11Q8WXI4 607 aaPredicted RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 HIST1H2ACQ93077 130 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 UTP4Q969X6 686 aaKnown RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 SDCCAG3Q96C92 435 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 GMPPAQ96IJ6 420 aaPredicted RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 TACO1Q9BSH4 297 aaKnown RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 CHID1Q9BWS9 393 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 ASPNQ9BXN1 380 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 GP6Q9HCN6 339 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 MAN2C1Q9NTJ4 1040 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 C6orf203Q9P0P8 240 aaPredicted RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 KLHL9Q9P2J3 617 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 ZNF629Q9UEG4 869 aaPredicted RBP13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 TESMINQ9Y4I5 508 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 CORINQ9Y5Q5 1042 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 ESPL1Q14674 2120 aa13.9□□□□□ -0.18
SLC6A4-205ENST00000579221 WIPF3A6NGB9 483 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 FTCDNL1E5RQL4 147 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 KPNA4O00629 521 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 KRT36O76013 467 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 CH25HO95992 272 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 IL18BPO95998 194 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 CBLP22681 906 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 RRM2P31350 389 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 UGT2B15P54855 530 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 LTBQ06643 244 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 SRSF1Q07955 248 aaKnown RBP eCLIP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 FGD3Q5JSP0 725 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 H1FNTQ75WM6 255 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 MAMDC2Q7Z304 686 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 LSRQ86X29 649 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 CCDC71Q8IV32 467 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 CCDC103Q8IW40 242 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 GCNT2Q8N0V5 402 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 SSC4DQ8WTU2 575 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 SGTBQ96EQ0 304 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 DHRS1Q96LJ7 313 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 SFXN3Q9BWM7 321 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 MEPEQ9NQ76 525 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 CCM2LQ9NUG4 571 aaPredicted RBP13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 RASD1Q9Y272 281 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 B3GALT5Q9Y2C3 310 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 EMC9Q9Y3B6 208 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 MED12Q93074 2177 aa13.89□□□□□ -0.19
SLC6A4-205ENST00000579221 SPENQ96T58 3664 aaKnown RBP13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 A0A087WUU8 490 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 CLEC18AA5D8T8 446 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 AQP7P3A6NL99 342 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 DVL2O14641 736 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 FZD7O75084 574 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 SS18L1O75177 396 aaPredicted RBP13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 VAMP5O95183 116 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 YES1P07947 543 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 NQO1P15559 274 aaKnown RBP13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 KLK2P20151 261 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 FUT4P22083 530 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 GRPRP30550 384 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 FOXF2Q12947 444 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 ZNF74Q16587 644 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 TMEM201Q5SNT2 666 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 PODNL1Q6PEZ8 512 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 TBPL2Q6SJ96 375 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 CLEC18BQ6UXF7 455 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 MBOAT2Q6ZWT7 520 aa13.88□□□□□ -0.19
SLC6A4-205ENST00000579221 FAM214BQ7L5A3 538 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms