RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ELK4P28324 431 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 MEOX1P50221 254 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 IST1P53990 364 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 CTBP2P56545 445 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 PPIAP62937 165 aaKnown RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 MERTKQ12866 999 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 COX10Q12887 443 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 SLC10A1Q14973 349 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 SEC23BQ15437 767 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 EXOC3L2Q2M3D2 409 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 C1orf94Q6P1W5 598 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 CD300LDQ6UXZ3 194 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 WDR88Q6ZMY6 472 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZBTB49Q6ZSB9 765 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ASB18Q6ZVZ8 466 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TMPRSS11FQ6ZWK6 438 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 RRM2BQ7LG56 351 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZER1Q7Z7L7 766 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TMEM179BQ7Z7N9 219 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 CCDC103Q8IW40 242 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TMEM251Q8N6I4 163 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 OR6S1Q8NH40 331 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 OR52J3Q8NH60 311 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 POC1BQ8TC44 478 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 GIPC3Q8TF64 312 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 LIPHQ8WWY8 451 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 DNAJC9Q8WXX5 260 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 EME1Q96AY2 570 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 WBP1Q96G27 269 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 JSRP1Q96MG2 331 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 PIGQQ9BRB3 760 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 POTEKPQ9BYX7 375 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 C7orf69Q9H7B7 122 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZDHHC11Q9H8X9 412 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 SERINC1Q9NRX5 453 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 USE1Q9NZ43 259 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 MGAT4BQ9UQ53 548 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 VDAC3Q9Y277 283 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TMED7Q9Y3B3 224 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 MED31Q9Y3C7 131 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 DOCK10Q96BY6 2186 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 PIEZO2Q9H5I5 2752 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 IGKV1D-42A0A075B6H8 117 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 OR2M5A3KFT3 312 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 A8MVM7 634 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 ACOT7O00154 380 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 EFNA2O43921 213 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 FZD7O75084 574 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 ZNF205O95201 554 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 RASAL1O95294 804 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 ZNF23P17027 643 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 HK1P19367 917 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 OMPP47874 163 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 PTDSS1P48651 473 aaKnown RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 B3GALT5-AS1P59052 145 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 PPP2R2BQ00005 443 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 EGR4Q05215 589 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 PRKCDQ05655 676 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 FOXF1Q12946 379 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 PPP1R8Q12972 351 aaKnown RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 TRIP10Q15642 601 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 SNCBQ16143 134 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 BCL2A1Q16548 175 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 PLEKHN1Q494U1 663 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 FGD3Q5JSP0 725 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 NKAPLQ5M9Q1 402 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 KDM4DQ6B0I6 523 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 FAHD1Q6P587 224 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 TTC33Q6PID6 262 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 TBPL2Q6SJ96 375 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 ZNF730Q6ZMV8 503 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 STK32CQ86UX6 486 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 EPHX4Q8IUS5 362 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 FAM109AQ8N4B1 249 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 ICA1LQ8NDH6 482 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 FAM83FQ8NEG4 500 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 OR4K5Q8NGD3 323 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 C9orf43Q8TAL5 461 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 SLC25A43Q8WUT9 341 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 NRG4Q8WWG1 115 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 PNPLA2Q96AD5 504 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 SDCCAG3Q96C92 435 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 FEVQ99581 238 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 CIB1Q99828 191 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 RBM4BQ9BQ04 359 aaKnown RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 RBM4Q9BWF3 364 aaKnown RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 DGCR6LQ9BY27 220 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 KLHL4Q9C0H6 718 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 VCX3BQ9H321 246 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 COQ10BQ9H8M1 238 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 KRCC1Q9NPI7 259 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 MEPEQ9NQ76 525 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 PDP1Q9P0J1 537 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 CHRNA9Q9UGM1 479 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 TP53TG5Q9Y2B4 290 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 SPIN1Q9Y657 262 aaPredicted RBP7.22□□□□□ -1.25
COPS3-215ENST00000578317 AP4B1Q9Y6B7 739 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 EPG5Q9HCE0 2579 aa7.22□□□□□ -1.25
COPS3-215ENST00000578317 SMG1Q96Q15 3661 aaKnown RBP7.21□□□□□ -1.26
COPS3-215ENST00000578317 PDLIM1O00151 329 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms