RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 FAM69AQ5T7M9 428 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RAET1LQ5VY80 246 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ARHGAP11AQ6P4F7 1023 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FAHD1Q6P587 224 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TBPL2Q6SJ96 375 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FAM180AQ6UWF9 173 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMPPEQ6ZT21 453 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ESPNLQ6ZVH7 1005 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZER1Q7Z7L7 766 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ADGRE4PQ86SQ3 457 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CDH24Q86UP0 819 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GGNQ86UU5 652 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZDHHC13Q8IUH4 622 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CHERPQ8IWX8 916 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OR4K5Q8NGD3 323 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OR52J3Q8NH60 311 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GIPC3Q8TF64 312 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 DNAJC9Q8WXX5 260 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ABTB1Q969K4 478 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SNRNP40Q96DI7 357 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 UCN2Q96RP3 112 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TIMP4Q99727 224 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PTDSS2Q9BVG9 487 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PRDM14Q9GZV8 571 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 DEFB127Q9H1M4 99 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PAQR5Q9NXK6 330 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 NKX1-2Q9UD57 310 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MGAT4BQ9UQ53 548 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMEM5Q9Y2B1 443 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RPH3AQ9Y2J0 694 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 MED31Q9Y3C7 131 aa10□□□□□ -0.81
CDK5RAP3-204ENST00000577664 LOC102725191A0A1B0GVB3 256 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZC3H12DA2A288 527 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SHISA8B8ZZ34 492 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PTP4A3O75365 173 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 WISP2O76076 250 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CCNB2O95067 398 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GASTP01350 101 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 BGLAPP02818 100 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ASAH2BP0C7U1 165 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GSSP48637 474 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 AGFG1P52594 562 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 IST1P53990 364 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 UGT2B15P54855 530 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CLDN18P56856 261 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RAC3P60763 192 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.813e-9■■■■■ 29.7
CDK5RAP3-204ENST00000577664 PPP2R2BQ00005 443 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 LTBQ06643 244 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TOMM20Q15388 145 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZNF74Q16587 644 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OGFRL1Q5TC84 451 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 C1orf140Q5VVS0 124 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 KDM4DQ6B0I6 523 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PPP4R4Q6NUP7 873 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PGBD2Q6P3X8 592 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZNF730Q6ZMV8 503 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RRM2BQ7LG56 351 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 CDK20Q8IZL9 346 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZNF295-AS1Q8N0V1 137 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 GHDCQ8N2G8 530 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TAAR8Q969N4 342 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 BPIFA2Q96DR5 249 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 KTI12Q96EK9 354 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 WDYHV1Q96HA8 205 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ARL5BQ96KC2 179 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SFXN2Q96NB2 322 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FEVQ99581 238 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FKRPQ9H9S5 495 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 USE1Q9NZ43 259 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 OAZ3Q9UMX2 235 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZNF835Q9Y2P0 537 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 U3KQV3 271 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 COL6A5A8TX70 2615 aa9.99□□□□□ -0.81
CDK5RAP3-204ENST00000577664 RTTNQ86VV8 2226 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 A0A0J9YW62 118 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 LIPT2A6NK58 231 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 AHRRA9YTQ3 701 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 NPIPA5E9PKD4 350 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 E9PQ18 207 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 H0Y3Z8 333 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZG16O60844 167 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 BAG2O95816 211 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ADAP00813 363 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 IMPDH2P12268 514 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZNF26P17031 533 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FPR3P25089 353 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SLC9A3P48764 834 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SUCLG1P53597 346 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 ZP4Q12836 540 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TSPAN31Q12999 210 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FHL1Q13642 323 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 TMEM176BQ3YBM2 270 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FGD3Q5JSP0 725 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 Q6ZPB1 254 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 SLC46A3Q7Z3Q1 461 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 FGD2Q7Z6J4 655 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 EPHX4Q8IUS5 362 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 NRMQ8IXM6 262 aa9.98□□□□□ -0.81
CDK5RAP3-204ENST00000577664 PM20D2Q8IYS1 436 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms