RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FNDC5Q8NAU1 212 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 STEAP2Q8NFT2 490 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 KBTBD8Q8NFY9 601 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 OR56A1Q8NGH5 318 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 PSMA8Q8TAA3 256 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 ZFP90Q8TF47 636 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 TUBGCP3Q96CW5 907 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 REXO5Q96IC2 774 aaKnown RBP5.5□□□□□ -1.53
NUP88-212ENST00000576708 OR5B2Q96R09 309 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 GPHA2Q96T91 129 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 SDF2Q99470 211 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 THUMPD3Q9BV44 507 aaKnown RBP5.5□□□□□ -1.53
NUP88-212ENST00000576708 DUSP26Q9BV47 211 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 EML4Q9HC35 981 aaKnown RBP5.5□□□□□ -1.53
NUP88-212ENST00000576708 GLRX2Q9NS18 164 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 KLHL13Q9P2N7 655 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 MKLN1Q9UL63 735 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 DTNAQ9Y4J8 743 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 RNF115Q9Y4L5 304 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 GPR45Q9Y5Y3 372 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 NAV3Q8IVL0 2385 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 DSCAMO60469 2012 aa5.5□□□□□ -1.53
NUP88-212ENST00000576708 A0A1W2PR80 420 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 SERINC4A6NH21 518 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 VGLL3A8MV65 326 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 FAM171A2A8MVW0 826 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 H3BNH8 94 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 ZNF264O43296 627 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 RAMP1O60894 148 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 TMEM127O75204 238 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 UGT2B17O75795 530 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 CPSF4O95639 269 aaKnown RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 HSPA4LO95757 839 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 IGHV3-9P01782 118 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 BPGMP07738 259 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 YES1P07947 543 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 DANCRP0C864 163 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 UBTFL6P0CB48 400 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 OR12D1P0DN82 309 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 UBL4AP11441 157 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 PAX1P15863 534 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 CCNA2P20248 432 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 MATN1P21941 496 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 PAX7P23759 505 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 ELK4P28324 431 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 SLC7A1P30825 629 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 ACVR1BP36896 505 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 RPL3P39023 403 aaKnown RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 FOXG1P55316 489 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 RPS4XP62701 263 aaKnown RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 VSNL1P62760 191 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 BSPH1Q075Z2 132 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 RASGEF1BQ0VAM2 473 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 SELENBP1Q13228 472 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 VEZF1Q14119 521 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 ODF1Q14990 250 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 RNPS1Q15287 305 aaKnown RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 STK11Q15831 433 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 ADRM1Q16186 407 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 PDCD2Q16342 344 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 CLEC12BQ2HXU8 276 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 PGGHGQ32M88 737 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 LSM12Q3MHD2 195 aaKnown RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 TIGD2Q4W5G0 525 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 NCMAPQ5T1S8 102 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 ADAM5Q6NVV9 412 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 BHLHA15Q7RTS1 189 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 ANKRD46Q86W74 232 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 EIF1ADQ8N9N8 165 aaKnown RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 ZNF527Q8NB42 609 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 GLB1L3Q8NCI6 653 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 TOR1AIP2Q8NFQ8 470 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 OR5W2Q8NH69 310 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 SFXN5Q8TD22 340 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 SMAP2Q8WU79 429 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 ZNF75CPQ92670 426 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 RAB8BQ92930 207 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 CPNE4Q96A23 557 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 ZG16BQ96DA0 208 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 SLC35G5Q96KT7 338 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 PSD2Q9BQI7 771 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 C20orf27Q9GZN8 174 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 HOXD1Q9GZZ0 328 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 OR51I1Q9H343 314 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 SEC61A2Q9H9S3 476 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 TIGARQ9NQ88 270 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 ATAD3AQ9NVI7 634 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 NPAP1Q9NZP6 1156 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 LGALS13Q9UHV8 139 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 LIPT1Q9Y234 373 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 MAGED1Q9Y5V3 778 aaPredicted RBP5.49□□□□□ -1.53
NUP88-212ENST00000576708 PRR14LQ5THK1 2151 aa5.49□□□□□ -1.53
NUP88-212ENST00000576708 RNF103-CHMP3A0A140T963 221 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 CLDN24A6NM45 220 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 GJE1A6NN92 205 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 OVOL3O00110 214 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 TYROBPO43914 113 aa5.48□□□□□ -1.53
NUP88-212ENST00000576708 EIF4E2O60573 245 aaKnown RBP5.48□□□□□ -1.53
NUP88-212ENST00000576708 CYTIPO60759 359 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms