RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CLIC3O95833 236 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 GNAO1P09471 354 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 IDUAP35475 653 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 CRISP1P54107 249 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 FXYD6P3P58550 94 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 ESRRGP62508 458 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 FHL1Q13642 323 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF555Q8NEP9 628 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 OR8D4Q8NGM9 314 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 TNFRSF13CQ96RJ3 184 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 POTEKPQ9BYX7 375 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 PRORYQ9H606 182 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 LHX6Q9UPM6 363 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 SIGLEC7Q9Y286 467 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 LIPGQ9Y5X9 500 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 CDH10Q9Y6N8 788 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 DSPP15924 2871 aaKnown RBP21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 A6NHS1 94 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 IMPDH2P12268 514 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 RAC1P63000 192 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 SLC10A1Q14973 349 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 PLEKHN1Q494U1 663 aaPredicted RBP21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 TMEM236Q5W0B7 351 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 TSPAN10Q9H1Z9 355 aaPredicted RBP21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 ADNPQ9H2P0 1102 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 ZDHHC11Q9H8X9 412 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 FKRPQ9H9S5 495 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 MCCC2Q9HCC0 563 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 SEC14L4Q9UDX3 406 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 ZNF229Q9UJW7 825 aa21.64■■□□□ 1.05
ATPAF1-213ENST00000574428 LOC100130705A0A1B0GUX0 176 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 ASAH2BP0C7U1 165 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 SLC9A3P48764 834 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 STARP49675 285 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 PTGES3Q15185 160 aaKnown RBP21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 OR7A5Q15622 319 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 ZBED5Q49AG3 693 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 NADK2Q4G0N4 442 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 CLEC12AQ5QGZ9 265 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 IQCF1Q8N6M8 205 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 LIPHQ8WWY8 451 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 SAMD8Q96LT4 415 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 TAAR6Q96RI8 345 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 ENKD1Q9H0I2 346 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 OR52D1Q9H346 318 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 TBC1D23Q9NUY8 699 aa21.63■■□□□ 1.05
ATPAF1-213ENST00000574428 BOD1L1Q8NFC6 3051 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 DPPA5A6NC42 116 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 FTCDNL1E5RQL4 147 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 H0YAE9 185 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 BCKDKO14874 412 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 OR2T1O43869 369 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 HCN1O60741 890 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 PTP4A3O75365 173 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 TNFAIP8O95379 198 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 MT-ATP6P00846 226 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 POU3F2P20265 443 aaPredicted RBP21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 MYF6P23409 242 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 FKBP2P26885 142 aaKnown RBP21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 GRPRP30550 384 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 CLDN20P56880 219 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 KRT80Q6KB66 452 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 TRILQ7L0X0 811 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 TEX47Q8TBZ9 253 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 ACKR4Q9NPB9 350 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 IL20Q9NYY1 176 aa21.62■■□□□ 1.05
ATPAF1-213ENST00000574428 LIPT2A6NK58 231 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 H0YC42 278 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 SLC16A6O15403 523 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 CLK1P49759 484 aaKnown RBP21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 TPD52P55327 224 aaPredicted RBP21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 SMARCD3Q6STE5 483 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 THSD4Q6ZMP0 1018 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 MAMDC2Q7Z304 686 aaPredicted RBP21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 NANOGNBQ7Z5D8 188 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 CLDN22Q8N7P3 220 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 MFSD8Q8NHS3 518 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 ZNF696Q9H7X3 374 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 HDGFL3Q9Y3E1 203 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 E9PQ18 207 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 BLOC1S5-TXNDC5H3BN57 136 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 SEC14L5O43304 696 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 HIST1H2ABP04908 130 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 RPS4XP62701 263 aaKnown RBP21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 TTC23Q5W5X9 447 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 C19orf48Q6RUI8 117 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 HIST3H2AQ7L7L0 130 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 GGNQ86UU5 652 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 UBQLNLQ8IYU4 475 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 OR6S1Q8NH40 331 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 OSTF1Q92882 214 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 HIST1H2ACQ93077 130 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 KLHL15Q96M94 604 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 PNPLA3Q9NST1 481 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 TUBD1Q9UJT1 453 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 GMPPBQ9Y5P6 360 aa21.61■■□□□ 1.05
ATPAF1-213ENST00000574428 GJE1A6NN92 205 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 ZAR1LA6NP61 321 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 M0R082 166 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 TNFSF11O14788 317 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms