RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 MAELQ96JY0 434 aaKnown RBP18.55■□□□□ 0.56
CHRNB1-206ENST00000574054 OR52B2Q96RD2 323 aa18.55■□□□□ 0.56
CHRNB1-206ENST00000574054 TAPBPLQ9BX59 468 aa18.55■□□□□ 0.56
CHRNB1-206ENST00000574054 SLC17A5Q9NRA2 495 aa18.55■□□□□ 0.56
CHRNB1-206ENST00000574054 SDR39U1Q9NRG7 319 aaPredicted RBP18.55■□□□□ 0.56
CHRNB1-206ENST00000574054 ADPRHL2Q9NX46 363 aa18.55■□□□□ 0.56
CHRNB1-206ENST00000574054 ATP23Q9Y6H3 246 aa18.55■□□□□ 0.56
CHRNB1-206ENST00000574054 TFPTP0C1Z6 253 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 PRG2P13727 222 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 CDH2P19022 906 aaPredicted RBP18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 TTKP33981 857 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 POLR2JP52435 117 aaKnown RBP18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 IRX1P78414 480 aaPredicted RBP18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 KLHL24Q6TFL4 600 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 B3GLCTQ6Y288 498 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 MSANTD1Q6ZTZ1 278 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 MUC15Q8N387 334 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 C1orf162Q8NEQ5 155 aaPredicted RBP18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 TMEM45BQ96B21 275 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 RHNO1Q9BSD3 238 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 AMBRA1Q9C0C7 1298 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 CBLN4Q9NTU7 201 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 ZNF232Q9UNY5 417 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 AMDHD2Q9Y303 409 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 COL6A5A8TX70 2615 aa18.54■□□□□ 0.56
CHRNB1-206ENST00000574054 ANK3Q12955 4377 aaKnown RBP18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 AQP7P3A6NL99 342 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 A8MVM7 634 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 KRT33AO76009 404 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 MPGP29372 298 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 SLC18A1P54219 525 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 RNF220Q5VTB9 566 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 MIER2Q8N344 545 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 C17orf78Q8N4C9 275 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 ZIC4Q8N9L1 334 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 HTRA1Q92743 480 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 ZNF385AQ96PM9 386 aaKnown RBP18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 SF3B5Q9BWJ5 86 aaKnown RBP18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 ARMC7Q9H6L4 198 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 THUMPD1Q9NXG2 353 aaKnown RBP18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 ADAM21Q9UKJ8 722 aa18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 FBN1P35555 2871 aaKnown RBP18.53■□□□□ 0.56
CHRNB1-206ENST00000574054 A0A0G2JPF8 293 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 HNRNPCL2B2RXH8 293 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 HNRNPCL3B7ZW38 293 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 HNRNPCL1O60812 293 aaKnown RBP18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 CRLF1O75462 422 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 HNRNPCL4P0DMR1 293 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 SLC25A3Q00325 362 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 ZSWIM7Q19AV6 140 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 C1orf140Q5VVS0 124 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 TMEM225Q6GV28 225 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 C11orf71Q6IPW1 123 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 DNM1P46Q6ZS02 220 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 SERPINA11Q86U17 422 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 POMGNT2Q8NAT1 580 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 TLCD1Q96CP7 247 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 SPATA9Q9BWV2 254 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 FKRPQ9H9S5 495 aa18.52■□□□□ 0.56
CHRNB1-206ENST00000574054 CR1P17927 2039 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 FAM234BA2RU67 622 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 FRS3O43559 492 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 WNT11O96014 354 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 PRPS1P60891 318 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 RAB35Q15286 201 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 HIKESHIQ53FT3 197 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 ZNF311Q5JNZ3 666 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 CLEC2AQ6UVW9 174 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 ABHD12BQ7Z5M8 362 aaPredicted RBP18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 MDFIQ99750 246 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 TMBIM4Q9HC24 238 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 YAE1D1Q9NRH1 226 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 PRDM4Q9UKN5 801 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 IFT52Q9Y366 437 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 USH1CQ9Y6N9 552 aa18.51■□□□□ 0.55
CHRNB1-206ENST00000574054 HEATR1Q9H583 2144 aaKnown RBP18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 IGHV4-30-2A0A087WSY4 118 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 KLF11O14901 512 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 NUDT7P0C024 238 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 HOXC5Q00444 222 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 ZNF544Q6NX49 715 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 SLC2A7Q6PXP3 512 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 GTF2H4Q92759 462 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 MAL2Q969L2 176 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 C3orf49Q96BT1 292 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 PAIP1Q9H074 479 aaKnown RBP18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 RAD21L1Q9H4I0 556 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 CHST2Q9Y4C5 530 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 PCDHB14Q9Y5E9 798 aa18.5■□□□□ 0.55
CHRNB1-206ENST00000574054 MXRA5Q9NR99 2828 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 A0A096LPI6 279 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 C5orf58C9J3I9 102 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 ZNF587BE7ETH6 402 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 ATP6V1G2-DDX39BF2Z307 99 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 CD5LO43866 347 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 ERLIN1O75477 346 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 AHSA1O95433 338 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 STX1BP61266 288 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 LGALS3BPQ08380 585 aa18.49■□□□□ 0.55
CHRNB1-206ENST00000574054 RGNQ15493 299 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms