RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 EEF1E1O43324 174 aaKnown RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 NPIPB7O75200 414 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 TNFSF13O75888 250 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 IFNW1P05000 195 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 YES1P07947 543 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 THRBP10828 461 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 IMPDH2P12268 514 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 NCK1P16333 377 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 FPR1P21462 350 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 GTF2E2P29084 291 aaKnown RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 RASSF2P50749 326 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 CDH12P55289 794 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 TAS2R41P59536 307 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 CEACAM7Q14002 265 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 MFSD13AQ14CX5 517 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 GUSBP1Q15486 140 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 CDSNQ15517 529 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 OR7A5Q15622 319 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 FXNQ16595 210 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 FBXL19-AS1Q494R0 122 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 DNAL1Q4LDG9 190 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 IFI44LQ53G44 452 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 TTC33Q6PID6 262 aaPredicted RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 PAQR6Q6TCH4 344 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 RBM45Q8IUH3 476 aaKnown RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 RELL2Q8NC24 303 aaPredicted RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 OR4D11Q8NGI4 311 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 MFSD8Q8NHS3 518 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 ADAMTS16Q8TE57 1224 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 POP5Q969H6 163 aaKnown RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 STARD4Q96DR4 205 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 SLC41A3Q96GZ6 507 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 TMEM43Q9BTV4 400 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 PRR14Q9BWN1 585 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 CADM1Q9BY67 442 aaKnown RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 MUC13Q9H3R2 512 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 SLC24A3Q9HC58 644 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 FANCFQ9NPI8 374 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 PLSCR4Q9NRQ2 329 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 DCAF13Q9NV06 445 aaKnown RBP9.84□□□□□ -0.83
CHD3-216ENST00000573936 JKAMPQ9P055 326 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 EMC3Q9P0I2 261 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 PROCRQ9UNN8 238 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 SNX13Q9Y5W8 968 aa9.84□□□□□ -0.83
CHD3-216ENST00000573936 MAP1AP78559 2803 aaPredicted RBP9.83□□□□□ -0.84
CHD3-216ENST00000573936 ARHGAP21Q5T5U3 1957 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 IGHV3-15A0A0B4J1V0 119 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 ZNF724A8MTY0 619 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 GPR171O14626 319 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 SMAD9O15198 467 aaKnown RBP9.83□□□□□ -0.84
CHD3-216ENST00000573936 GSC2O15499 205 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 DNAJC8O75937 253 aaPredicted RBP9.83□□□□□ -0.84
CHD3-216ENST00000573936 SMNDC1O75940 238 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHD3-216ENST00000573936 OR5F1O95221 314 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 STAMBPO95630 424 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 CD8BP10966 210 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 SSTR2P30874 369 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 OR1E2P47887 323 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 SIRPAP78324 504 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 H3F3AP84243 136 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 EGR4Q05215 589 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 TFF3Q07654 80 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 ST3GAL3Q11203 375 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 FAM69AQ5T7M9 428 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 LINC00114Q6XXX2 140 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 DEF8Q6ZN54 512 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 BTLAQ7Z6A9 289 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 STK32CQ86UX6 486 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 CYP4Z1Q86W10 505 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 KIF18BQ86Y91 864 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 TUSC5Q8IXB3 177 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 ABHD3Q8WU67 409 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 RNASE6Q93091 150 aaKnown RBP9.83□□□□□ -0.84
CHD3-216ENST00000573936 HSH2DQ96JZ2 352 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 CLPTM1LQ96KA5 538 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 NSMCE2Q96MF7 247 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 HS6ST2Q96MM7 605 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 PSD2Q9BQI7 771 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 THTPAQ9BU02 230 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 SF3B5Q9BWJ5 86 aaKnown RBP9.83□□□□□ -0.84
CHD3-216ENST00000573936 RBM24Q9BX46 236 aaKnown RBP9.83□□□□□ -0.84
CHD3-216ENST00000573936 SLC19A3Q9BZV2 496 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 BCO1Q9HAY6 547 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 KLHL13Q9P2N7 655 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 SLC7A7Q9UM01 511 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 CLEC4AQ9UMR7 237 aa9.83□□□□□ -0.84
CHD3-216ENST00000573936 AQP7P3A6NL99 342 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 A8MXE2 369 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 PDE5AO76074 875 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 VAMP5O95183 116 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 CGAP01215 116 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 ITGA2P17301 1181 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 TNFRSF1BP20333 461 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 AGTR1P30556 359 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 RBM34P42696 430 aaKnown RBP9.82□□□□□ -0.84
CHD3-216ENST00000573936 RPS5P46782 204 aaKnown RBP9.82□□□□□ -0.84
CHD3-216ENST00000573936 PCYT1AP49585 367 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 MTX3Q5HYI7 312 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 OTUD3Q5T2D3 398 aaPredicted RBP9.82□□□□□ -0.84
CHD3-216ENST00000573936 TMEM225Q6GV28 225 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms