RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 LGALS3BPQ08380 585 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.36□□□□□ -0.11
NUP88-207ENST00000573584 OR1E3Q8WZA6 343 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 RERGQ96A58 199 aaPredicted RBP14.36□□□□□ -0.11
NUP88-207ENST00000573584 NMNAT3Q96T66 252 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 GFI1Q99684 422 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 PLEKHA1Q9HB21 404 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 NANSQ9NR45 359 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 POLE3Q9NRF9 147 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 ANKRD10Q9NXR5 420 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 DNAJB12Q9NXW2 375 aaKnown RBP14.36□□□□□ -0.11
NUP88-207ENST00000573584 KLHL9Q9P2J3 617 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 PILRAQ9UKJ1 303 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 LINC01553A4QN01 128 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 H0YGG7 62 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 GABARAPH6UMI1 98 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 AIPO00170 330 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 PLRG1O43660 514 aaKnown RBP14.35□□□□□ -0.11
NUP88-207ENST00000573584 GPRIN2O60269 458 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 OR7A10O76100 309 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ACTR1BP42025 376 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 MAGEB1P43366 347 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 CLDN12P56749 244 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 AP3S2P59780 193 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ACTR1AP61163 376 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ARF3P61204 181 aaPredicted RBP14.35□□□□□ -0.11
NUP88-207ENST00000573584 TSPAN5P62079 268 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ENPP2Q13822 863 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 AANATQ16613 207 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 METTL11BQ5VVY1 283 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 APOOLQ6UXV4 268 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 GLRX5Q86SX6 157 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 OR52R1Q8NGF1 315 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 OR6K6Q8NGW6 343 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 PHYHIPQ92561 330 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 SLC25A38Q96DW6 304 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 HSPA12BQ96MM6 686 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 LRFN5Q96NI6 719 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 C2orf42Q9NWW7 574 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ZNF224Q9NZL3 707 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 IDSB3KWA1 339 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 PSMD9O00233 223 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 IMPA2O14732 288 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 PDCD5O14737 125 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ARPC1BO15143 372 aaKnown RBP14.35□□□□□ -0.11
NUP88-207ENST00000573584 KHDRBS3O75525 346 aaKnown RBP14.35□□□□□ -0.11
NUP88-207ENST00000573584 ITGA10O75578 1167 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 NKX2-2O95096 273 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 FCARP24071 287 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 TCTE1Q5JU00 501 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 SLC25A25Q6KCM7 469 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 SEZ6L2Q6UXD5 910 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 SPERTQ8NA61 448 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 FCAMRQ8WWV6 532 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 DDOQ99489 341 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ZFYVE21Q9BQ24 234 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 GSX2Q9BZM3 304 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 LIN7BQ9HAP6 207 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ENTPD2Q9Y5L3 495 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 OR6C74A6NCV1 312 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 NAP1L6A6NFF2 107 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 KRT33AO76009 404 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 DPP4P27487 766 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 ZNF267Q14586 743 aaPredicted RBP14.35□□□□□ -0.11
NUP88-207ENST00000573584 ULK3Q6PHR2 472 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 NUDT18Q6ZVK8 323 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 GRAMD2AQ8IUY3 354 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 LSMEM1Q8N8F7 131 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 OR4N2Q8NGD1 307 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 CTHRC1Q96CG8 243 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 WSB2Q9NYS7 404 aaPredicted RBP14.35□□□□□ -0.11
NUP88-207ENST00000573584 ACTR10Q9NZ32 417 aa14.35□□□□□ -0.11
NUP88-207ENST00000573584 A0A1B0GUH1 482 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 OR5K3A6NET4 321 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 CBX7O95931 251 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 RRASP10301 218 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 ADPRHP54922 357 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 STX4Q12846 297 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 KIRREL2Q6UWL6 708 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 LINC00114Q6XXX2 140 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 DGAT2L6Q6ZPD8 337 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 KANSL1Q7Z3B3 1105 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 FAM3CQ92520 227 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 TSACCQ96A04 125 aaPredicted RBP14.34□□□□□ -0.11
NUP88-207ENST00000573584 SGTBQ96EQ0 304 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 S100A16Q96FQ6 103 aaKnown RBP14.34□□□□□ -0.11
NUP88-207ENST00000573584 MRPL48Q96GC5 212 aaKnown RBP14.34□□□□□ -0.11
NUP88-207ENST00000573584 SEC22CQ9BRL7 303 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 NOX3Q9HBY0 568 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 MKKSQ9NPJ1 570 aaPredicted RBP14.34□□□□□ -0.11
NUP88-207ENST00000573584 NPDC1Q9NQX5 325 aaPredicted RBP14.34□□□□□ -0.11
NUP88-207ENST00000573584 ZNF281Q9Y2X9 895 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 OR6C68A6NDL8 312 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 ANKRD61A6NGH8 418 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 HRGP04196 525 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 RAD52P43351 418 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 VEGFBP49765 207 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 PSG6Q00889 435 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 NPEPL1Q8NDH3 523 aa14.34□□□□□ -0.11
NUP88-207ENST00000573584 FAM71CQ8NEG0 241 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms