RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 ITPR1Q14643 2758 aa8.46□□□□□ -1.05
NPLOC4-208ENST00000572351 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.05
NPLOC4-208ENST00000572351 CACNA1GO43497 2377 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 SH3PXD2BA1X283 911 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 HTR3EA5X5Y0 456 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 EFCAB9A8MZ26 197 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 LRRN3E7EW58 273 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 DNPH1O43598 174 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 AKR7A3O95154 331 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 FUT1P19526 365 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 DNAJA1P31689 397 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 CA7P43166 264 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 GPR4P46093 362 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 UQCRFS1P47985 274 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 PER3P56645 1201 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 PRKCDQ05655 676 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 PMS2P3Q13401 168 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 LAPTM4AQ15012 233 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 SEC23BQ15437 767 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 TAF11Q15544 211 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF74Q16587 644 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF239Q16600 458 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 EIF2S3LQ2VIR3 472 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 EMC4Q5J8M3 183 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 OTUD3Q5T2D3 398 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 Q6ZPB1 254 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 FCRLAQ7L513 359 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 MAMDC2Q7Z304 686 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 NANOGNBQ7Z5D8 188 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 GPAT4Q86UL3 456 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 MEX3DQ86XN8 651 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 OR10G2Q8NGC3 310 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 OR6S1Q8NH40 331 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 LRTOMTQ8WZ04 291 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 ROBO4Q8WZ75 1007 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 BPIFA2Q96DR5 249 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 FAM46AQ96IP4 442 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 TM9SF2Q99805 663 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 PTDSS2Q9BVG9 487 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 SEMA6AQ9H2E6 1030 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 FKRPQ9H9S5 495 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 CALHM2Q9HA72 323 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 MEPEQ9NQ76 525 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF229Q9UJW7 825 aa8.46□□□□□ -1.06
NPLOC4-208ENST00000572351 A0A1B0GUH1 482 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 CD8B2A6NJW9 211 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 FTCDNL1E5RQL4 147 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 E9PLN8 166 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 H3BNX3 289 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 M0R082 166 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 CCL21O00585 134 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 SMAD9O15198 467 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 OR7A10O76100 309 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 TGM6O95932 706 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 IL2RAP01589 272 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 BGLAPP02818 100 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 STSP08842 583 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF23P17027 643 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 AHCYP23526 432 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 AGFG1P52594 562 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 HMGA2P52926 109 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 IST1P53990 364 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 CTBP2P56545 445 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 ELF3P78545 371 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 RNPS1Q15287 305 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 MICAQ29983 383 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 NSUN5P2Q63ZY6 315 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 TMEM225Q6GV28 225 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 TMEM211Q6ICI0 200 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 OR2A2Q6IF42 318 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 PAQR6Q6TCH4 344 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 PLXDC2Q6UX71 529 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 H1FNTQ75WM6 255 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 AMIGO2Q86SJ2 522 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 FJX1Q86VR8 437 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 SLC43A2Q8N370 569 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 SCAIQ8N9R8 606 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 ATG16L2Q8NAA4 619 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 AQP11Q8NBQ7 271 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 ICA1LQ8NDH6 482 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 OR9Q2Q8NGE9 314 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 OR4C15Q8NGM1 316 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 OR5J2Q8NH18 312 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF417Q8TAU3 575 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 GIPC3Q8TF64 312 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 WNT2BQ93097 391 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 CENPNQ96H22 339 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 MOGAT1Q96PD6 335 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 UCN2Q96RP3 112 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 ZNF587Q96SQ5 575 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 PKP2Q99959 881 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 VKORC1Q9BQB6 163 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 NDEL1Q9GZM8 345 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 CHST11Q9NPF2 352 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 VNN3Q9NY84 501 aa8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 MRPL39Q9NYK5 338 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-208ENST00000572351 PDP1Q9P0J1 537 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms