RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 OR4D1Q15615 310 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 RBBP7Q16576 425 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 HKDC1Q2TB90 917 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 LACTB2Q53H82 288 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 XKR6Q5GH73 641 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 TEX35Q5T0J7 233 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 FRMPD2BQ6IN97 320 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 TEX38Q6PEX7 206 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 BHLHB9Q6PI77 547 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 FAM198BQ6UWH4 519 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 TMEM207Q6UWW9 146 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 TMIGD1Q6UXZ0 262 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 MBOAT1Q6ZNC8 495 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 LRRC70Q7Z2Q7 622 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 COMMD2Q86X83 199 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 KLHDC8AQ8IYD2 350 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SNX31Q8N9S9 440 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 OR51Q1Q8NH59 317 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 ACMSDQ8TDX5 336 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 ANKRD49Q8WVL7 239 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 UBLCP1Q8WVY7 318 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 DYRK2Q92630 601 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 NEIL2Q969S2 332 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 ATP6V1E2Q96A05 226 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 PYCR2Q96C36 320 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 TM4SF19Q96DZ7 209 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 OR4K3Q96R72 315 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 MRPL57Q9BQC6 102 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 EFCAB11Q9BUY7 163 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SLC25A23Q9BV35 468 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 MRPL1Q9BYD6 325 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 ROGDIQ9GZN7 287 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 ING2Q9H160 280 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 CDC42EP4Q9H3Q1 356 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 ALG9Q9H6U8 611 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 NT5DC2Q9H857 520 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 DNAJC11Q9NVH1 559 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 PSMC3IPQ9P2W1 217 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 OPTCQ9UBM4 332 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 TRPC4Q9UBN4 977 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 C19orf25Q9UFG5 118 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 DCDC2Q9UHG0 476 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 MRPS18BQ9Y676 258 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 SPACA6W5XKT8 324 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 PIKFYVEQ9Y2I7 2098 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 KMT2BQ9UMN6 2715 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 APC2O95996 2303 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 USP24Q9UPU5 2620 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 ITPR1Q14643 2758 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 IGLV3-12A0A075B6K2 115 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 A0A0A6YYC8 382 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 NSG1A0A0A6YYJ2 146 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 hCG_1807616A0A1W2PRN6 198 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 FEZF1A0PJY2 475 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 LRIT2A6NDA9 550 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MSGN1A6NI15 193 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 VSTM2BA6NLU5 285 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TRIM49D1C9J1S8 452 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 I3L1I5 382 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 K7EPI3 171 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 UBXN8O00124 270 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CLDN4O14493 209 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 HCRTR1O43613 425 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 LCMT2O60294 686 aaKnown RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 GALR3O60755 368 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 DPM1O60762 260 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CDC123O75794 336 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 WISP3O95389 354 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 C1QAP02745 245 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 GPIP06744 558 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CAPN1P07384 714 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 UQCRHP07919 91 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 GSTA1P08263 222 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 OR2T7P0C7T2 308 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 C8orf89P0DMQ9 161 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 PORP16435 677 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 TLX1P31314 330 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 HNF4AP41235 474 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CASP2P42575 452 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 XCR1P46094 333 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 SLC6A12P48065 614 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CCL11P51671 97 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 ARFIP1P53367 373 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 KLC1Q07866 573 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 ACTN3Q08043 901 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 IFFO1Q0D2I5 559 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 KLRB1Q12918 225 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 CHIT1Q13231 466 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 DOC2AQ14183 400 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 LY6DQ14210 128 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 EFTUD2Q15029 972 aaKnown RBP eCLIP3.45□□□□□ -1.86
NUP88-202ENST00000570937 NTRK2Q16620 822 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 LINC00303Q3SY05 128 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 DEFB134Q4QY38 66 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 MFSD4BQ5TF39 518 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 AGAP7PQ5VUJ5 663 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 LIPJQ5W064 366 aa3.45□□□□□ -1.86
NUP88-202ENST00000570937 TTC19Q6DKK2 380 aaPredicted RBP3.45□□□□□ -1.86
NUP88-202ENST00000570937 MZT2BQ6NZ67 158 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms