RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 UPK3AO75631 287 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 UGT2B17O75795 530 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 IGHV2-5P01817 119 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 HOXB1P14653 301 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 GATA3P23771 443 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 RYKP34925 604 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 PGM1P36871 562 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 SELENOPP49908 381 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 MVKQ03426 396 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 TP53BP2Q13625 1128 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 MAD2L1BPQ15013 274 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 SLC9A3R2Q15599 337 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 OTUD3Q5T2D3 398 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 REP15Q6BDI9 236 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 RHOUQ7L0Q8 258 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 OLIG3Q7RTU3 272 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 LRP11Q86VZ4 500 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 FAM71CQ8NEG0 241 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 OR5D16Q8NGK9 328 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 CLHC1Q8NHS4 586 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 WFDC12Q8WWY7 111 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 SLC25A28Q96A46 364 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMIGD2Q96BF3 282 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 RAB39BQ96DA2 213 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 TSSK3Q96PN8 268 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 OR7D2Q96RA2 312 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 CCT8L2Q96SF2 557 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 SYT3Q9BQG1 590 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 SF3B5Q9BWJ5 86 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 SERHL2Q9H4I8 314 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 CRLF2Q9HC73 371 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 MOV10Q9HCE1 1003 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 MID1IP1Q9NPA3 183 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 OXSMQ9NWU1 459 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMEM216Q9P0N5 145 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 MYEF2Q9P2K5 600 aaKnown RBP8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 BAIAP2L1Q9UHR4 511 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 FAF1Q9UNN5 650 aaPredicted RBP8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 STK38LQ9Y2H1 464 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 MMP24Q9Y5R2 645 aa8.92□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMED7-TICAM2A0A0A6YYA0 188 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMEM72A0PK05 275 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 ZC3H12DA2A288 527 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 FAM187AA6NFU0 413 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 CLDN34H7C241 214 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 RAD51CO43502 376 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 CDC14BO60729 498 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 AKR7A3O95154 331 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 NAT2P11245 290 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 SDC1P18827 310 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 TAC1P20366 129 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 PRPH2P23942 346 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 ARR3P36575 388 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 CCT3P49368 545 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 PRKAA2P54646 552 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 NPRL3Q12980 569 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 MAPK14Q16539 360 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 EMBQ6PCB8 327 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 ZDHHC24Q6UX98 284 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 EIF3MQ7L2H7 374 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 GPAT4Q86UL3 456 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 IL17RDQ8NFM7 739 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 L3HYPDHQ96EM0 354 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 METTL2AQ96IZ6 378 aaKnown RBP8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 FCRL1Q96LA6 429 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 GPA33Q99795 319 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 CITED1Q99966 193 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 GSTO2Q9H4Y5 243 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 PIF1Q9H611 641 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 ACSS3Q9H6R3 686 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 RRAGDQ9NQL2 400 aaPredicted RBP8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 NUP50Q9UKX7 468 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 MKLN1Q9UL63 735 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 PCDHGB4Q9UN71 923 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 TMED7Q9Y3B3 224 aa8.91□□□□□ -0.98
CTDNEP1-202ENST00000570380 M0QZ24 198 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 ZNF208O43345 1280 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 KNG1P01042 644 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 KRT16P08779 473 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 BCKDHAP12694 445 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 GLRXP35754 106 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 MAGEB1P43366 347 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 ARF1P84077 181 aaKnown RBP8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 ROR2Q01974 943 aaKnown RBP8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 PLAURQ03405 335 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 CEACAM7Q14002 265 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 KLF17Q5JT82 389 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 SAXO2Q658L1 398 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 CREB3L2Q70SY1 520 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 MDP1Q86V88 176 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 KIR3DL3Q8N743 410 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 OR56A1Q8NGH5 318 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 PSMA8Q8TAA3 256 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 PMM1Q92871 262 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 DDIT4LQ96D03 193 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 CCT7Q99832 543 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 ZNF385DQ9H6B1 395 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 TNFRSF12AQ9NP84 129 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 C1orf109Q9NX04 203 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 PLEK2Q9NYT0 353 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms