RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 OLIG3Q7RTU3 272 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 SPATA19Q7Z5L4 167 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 ZNF440Q8IYI8 595 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 CLEC4FQ8N1N0 589 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 RIBC1Q8N443 379 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 ZIC4Q8N9L1 334 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 LINC01356Q8N9X3 169 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 ANKK1Q8NFD2 765 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 OR1K1Q8NGR3 316 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 EPS8L3Q8TE67 593 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 ZFAND2BQ8WV99 257 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 RAB8BQ92930 207 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 TESCQ96BS2 214 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 DNAJA3Q96EY1 480 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 ANKRD27Q96NW4 1050 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 TRNT1Q96Q11 434 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 ZDHHC2Q9UIJ5 367 aa13.7□□□□□ -0.22
HERPUD1-215ENST00000568676 CFAP73A6NFT4 308 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 LIPT2A6NK58 231 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 KLF11O14901 512 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 SCN2BO60939 215 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 IGLV1-44P01699 117 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 DAOP14920 347 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 CDH2P19022 906 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 RUNX1T1Q06455 604 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 TMEM225Q6GV28 225 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 ANKRD16Q6P6B7 361 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 CNOT9Q92600 299 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 AURKBQ96GD4 344 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 ZNF385AQ96PM9 386 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 MECRQ9BV79 373 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 TAPBPLQ9BX59 468 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 DPY30Q9C005 99 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 ADAM19Q9H013 955 aa13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 MTHFD2LQ9H903 347 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 MARCOQ9UEW3 520 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-215ENST00000568676 AP3D1O14617 1153 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 IGKV3-15P01624 115 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 IL7RP16871 459 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 CXCR1P25024 350 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 CHI3L1P36222 383 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 POU3F1Q03052 451 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 PLAURQ03405 335 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 EPS8Q12929 822 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 CEACAM7Q14002 265 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 C12orf54Q6X4T0 127 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 LRRC74BQ6ZQY2 392 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 ZCCHC23Q6ZST2 131 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 GPAT4Q86UL3 456 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 LRRC34Q8IZ02 419 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 ZNF786Q8N393 782 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 TRIML2Q8N7C3 387 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 TMEM99Q8N816 258 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 IL17RDQ8NFM7 739 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 WDR60Q8WVS4 1066 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 C1orf159Q96HA4 380 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 RHOXF2Q9BQY4 288 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 LINC00470Q9BZP3 86 aa13.68□□□□□ -0.22
HERPUD1-215ENST00000568676 A0A096LPI6 279 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 ZC3H12DA2A288 527 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 HMGN4O00479 90 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 LILRA1O75019 489 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 AKR7A3O95154 331 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 CPSF4O95639 269 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 DBIP07108 87 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 CECR9P0C854 216 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 NPR2P20594 1047 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 APEX1P27695 318 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 CLNS1AP54105 237 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 DVL1P1P54792 670 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 CDH15P55291 814 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 LRRC74AQ0VAA2 488 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 CASP8Q14790 479 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 OR7A5Q15622 319 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 DEF8Q6ZN54 512 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 CCDC36Q8IYA8 594 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 KIRREL3Q8IZU9 778 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 KIF18AQ8NI77 898 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 BCL2L2Q92843 193 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 SLC35A5Q9BS91 424 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 SOX7Q9BT81 388 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 SLC38A1Q9H2H9 487 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 RASD1Q9Y272 281 aa13.67□□□□□ -0.22
HERPUD1-215ENST00000568676 LRP5LA4QPB2 252 aa13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 A8MVM7 634 aa13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 hCG_2039718K7EN88 272 aa13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 LGI1O95970 557 aa13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 ITGA2P17301 1181 aa13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 RPS4Y1P22090 263 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 ARRB2P32121 409 aa13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 COPZ1P61923 177 aa13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-215ENST00000568676 VHLLQ6RSH7 139 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms