RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TESMINQ9Y4I5 508 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 HELZ2Q9BYK8 2649 aaKnown RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 A0A087WUU8 490 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 TRBV4-1A0A0J9YWV2 114 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 KPNA4O00629 521 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-222ENST00000568034 RRP9O43818 475 aaKnown RBP16.07■□□□□ 0.16
COMMD4-222ENST00000568034 CIB2O75838 187 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 RNF224P0DH78 156 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 IFNA8P32881 189 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 LIMS1P48059 325 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 SLC35A1P78382 337 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 SPIBQ01892 262 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 GUSBP1Q15486 140 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 TMEM211Q6ICI0 200 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 FCRLAQ7L513 359 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 SLC46A3Q7Z3Q1 461 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 ABHD3Q8WU67 409 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 MOGAT1Q96PD6 335 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 ZNF347Q96SE7 839 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 EPYCQ99645 322 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 CHID1Q9BWS9 393 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 C20orf141Q9NUB4 165 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 CCM2LQ9NUG4 571 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-222ENST00000568034 SEC14L4Q9UDX3 406 aa16.07■□□□□ 0.16
COMMD4-222ENST00000568034 USP9XQ93008 2570 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-222ENST00000568034 A0A0G2JNJ9 132 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 ENO4A6NNW6 628 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 FKBP6O75344 327 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 AKR7A3O95154 331 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 RCBTB2O95199 551 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 SYNGR4O95473 234 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 IGF2P01344 180 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 RRM2P31350 389 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 ACTR3P61158 418 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 SEC23BQ15437 767 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 ZNF74Q16587 644 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 TBPL2Q6SJ96 375 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 PAQR6Q6TCH4 344 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 P4HA3Q7Z4N8 544 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 TMEM99Q8N816 258 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 ACOT11Q8WXI4 607 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-222ENST00000568034 DUS3LQ96G46 650 aaKnown RBP16.06■□□□□ 0.16
COMMD4-222ENST00000568034 HS6ST2Q96MM7 605 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 TM9SF2Q99805 663 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 Q9UFV3 132 aa16.06■□□□□ 0.16
COMMD4-222ENST00000568034 FASNP49327 2511 aaKnown RBP16.06■□□□□ 0.16
COMMD4-222ENST00000568034 FLNCQ14315 2725 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 OR2T1O43869 369 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 CYTIPO60759 359 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 FCGR2AP12318 317 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 GRPRP30550 384 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 FOXF2Q12947 444 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 KPNB1Q14974 876 aaKnown RBP16.05■□□□□ 0.16
COMMD4-222ENST00000568034 FGD3Q5JSP0 725 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 PPP4R4Q6NUP7 873 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 PODNL1Q6PEZ8 512 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 CCDC103Q8IW40 242 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 NRMQ8IXM6 262 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 GCNT2Q8N0V5 402 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 OR4C15Q8NGM1 316 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 OR52J3Q8NH60 311 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 RND1Q92730 232 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 SLC25A36Q96CQ1 311 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 RSRC1Q96IZ7 334 aaKnown RBP16.05■□□□□ 0.16
COMMD4-222ENST00000568034 ZFP3Q96NJ6 502 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 RAB3IPQ96QF0 476 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-222ENST00000568034 TAPBPLQ9BX59 468 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 DENND2DQ9H6A0 471 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-222ENST00000568034 CLEC4AQ9UMR7 237 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 RNF6Q9Y252 685 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 MED31Q9Y3C7 131 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 LYVE1Q9Y5Y7 322 aa16.05■□□□□ 0.16
COMMD4-222ENST00000568034 INTS1Q8N201 2190 aaKnown RBP16.04■□□□□ 0.16
COMMD4-222ENST00000568034 AQP7P3A6NL99 342 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 ZNF716A6NP11 495 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 M0R082 166 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 EIF1BO60739 113 aaKnown RBP16.04■□□□□ 0.16
COMMD4-222ENST00000568034 ZG16O60844 167 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 TNFSF13O75888 250 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 GADD45GO95257 159 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 LDLRP01130 860 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 HOXB6P17509 224 aaKnown RBP16.04■□□□□ 0.16
COMMD4-222ENST00000568034 CBLP22681 906 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 HMGA2P52926 109 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 CTBP2P56545 445 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 CDSNQ15517 529 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 OTUD3Q5T2D3 398 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-222ENST00000568034 OR2T5Q6IEZ7 315 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 MTFR2Q6P444 385 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 MBOAT2Q6ZWT7 520 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 CCDC71Q8IV32 467 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-222ENST00000568034 LIX1LQ8IVB5 337 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 OR2T29Q8NH02 315 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 ZNF417Q8TAU3 575 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 INTS12Q96CB8 462 aaKnown RBP16.04■□□□□ 0.16
COMMD4-222ENST00000568034 ZHX1-C8orf76Q96EF9 292 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 ZNF587Q96SQ5 575 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-222ENST00000568034 PSD2Q9BQI7 771 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 PRRG4Q9BZD6 226 aa16.04■□□□□ 0.16
COMMD4-222ENST00000568034 GCN1Q92616 2671 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms