RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ECSITQ9BQ95 431 aa1.24□□□□□ -2.21
CDH1-211ENST00000567320 ATG10Q9H0Y0 220 aa1.24□□□□□ -2.21
CDH1-211ENST00000567320 SRMSQ9H3Y6 488 aa1.24□□□□□ -2.21
CDH1-211ENST00000567320 SLCO1B3Q9NPD5 702 aa1.24□□□□□ -2.21
CDH1-211ENST00000567320 QPCTLQ9NXS2 382 aa1.24□□□□□ -2.21
CDH1-211ENST00000567320 MYO16Q9Y6X6 1858 aa1.24□□□□□ -2.21
CDH1-211ENST00000567320 PIKFYVEQ9Y2I7 2098 aa1.24□□□□□ -2.21
CDH1-211ENST00000567320 ABCC4O15439 1325 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 IGHV5-51A0A0C4DH38 117 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 C16orf90A8MZG2 172 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 INS-IGF2F8WCM5 200 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 DCTN6O00399 190 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 P0C880 135 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 RRASP10301 218 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 YWHABP31946 246 aaKnown RBP1.23□□□□□ -2.21
CDH1-211ENST00000567320 RFC4P35249 363 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 SLC26A5P58743 744 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 PDIA5Q14554 519 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 GUCA2BQ16661 112 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 BCL7AQ4VC05 210 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 PARP10Q53GL7 1025 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 LDLRAP1Q5SW96 308 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 GPRC6AQ5T6X5 926 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 CBLN3Q6UW01 205 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 SLC26A11Q86WA9 606 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 LGI3Q8N145 548 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 URGCPQ8TCY9 931 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 CD300LFQ8TDQ1 290 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 MRPS31Q92665 395 aaKnown RBP1.23□□□□□ -2.21
CDH1-211ENST00000567320 TM4SF19Q96DZ7 209 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 NSMCE2Q96MF7 247 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 TMEM246Q9BRR3 403 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 GSDMCQ9BYG8 508 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 YAE1D1Q9NRH1 226 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 SAMSN1Q9NSI8 373 aaKnown RBP1.23□□□□□ -2.21
CDH1-211ENST00000567320 CYP39A1Q9NYL5 469 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 AIPL1Q9NZN9 384 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 ZNRD1Q9P1U0 126 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 SAMHD1Q9Y3Z3 626 aaKnown RBP1.23□□□□□ -2.21
CDH1-211ENST00000567320 TMEM14AQ9Y6G1 99 aa1.23□□□□□ -2.21
CDH1-211ENST00000567320 NFASCO94856 1347 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 A0A1B0GUS0 222 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 RBMY1BA6NDE4 496 aaKnown RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 RBMY1EA6NEQ0 496 aaKnown RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 A8MUU9 505 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 SLC31A2O15432 143 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 STAMBPO95630 424 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 IGF1P05019 195 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 CA3P07451 260 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 RBMY1DP0C7P1 496 aaKnown RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 RBMY1A1P0DJD3 496 aaKnown RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 ZNF30P17039 623 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 MUTP22033 750 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 DAP3P51398 398 aaKnown RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 GABPB1Q06547 395 aaPredicted RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 CYTH1Q15438 398 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 COA6Q5JTJ3 125 aaKnown RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 OR6B2Q6IFH4 312 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 LCN12Q6JVE5 192 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 C1orf94Q6P1W5 598 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 LYPD2Q6UXB3 125 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 OR1N2Q8NGR9 330 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 L3HYPDHQ96EM0 354 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 PAGE5Q96GU1 130 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 AKR1E2Q96JD6 320 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 CCNL2Q96S94 520 aaPredicted RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 SULT4A1Q9BR01 284 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 ZNF416Q9BWM5 594 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 DEFB127Q9H1M4 99 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 C2orf40Q9H1Z8 148 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 DHX33Q9H6R0 707 aaKnown RBP1.22□□□□□ -2.21
CDH1-211ENST00000567320 NUDT15Q9NV35 164 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 CLCF1Q9UBD9 225 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 STAP1Q9ULZ2 295 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 NUDCQ9Y266 331 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 PCNX2A6NKB5 2137 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 FRMPD3Q5JV73 1810 aa1.22□□□□□ -2.21
CDH1-211ENST00000567320 MN1Q10571 1320 aaPredicted RBP1.21□□□□□ -2.22
CDH1-211ENST00000567320 ARPC4-TTLL3A0A0A6YYG9 625 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 IGHV3-66A0A0C4DH42 116 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 CFAP73A6NFT4 308 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 ZNF850A8MQ14 1090 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SGK1O00141 431 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 CA1P00915 261 aaPredicted RBP1.21□□□□□ -2.22
CDH1-211ENST00000567320 ZDHHC11BP0C7U3 371 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 PRPS2P11908 318 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 CALCRP30988 508 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 TGFBR1P36897 503 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 CX3CR1P49238 355 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 HSPA2P54652 639 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 NAPAP54920 295 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SYCNQ0VAF6 134 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 ASPHQ12797 758 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 BAMBIQ13145 260 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SGCAQ16586 387 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 PARP15Q460N3 678 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SAMD4BQ5PRF9 694 aaKnown RBP1.21□□□□□ -2.22
CDH1-211ENST00000567320 TRIM69Q86WT6 500 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 SNX32Q86XE0 403 aa1.21□□□□□ -2.22
CDH1-211ENST00000567320 IQCA1Q86XH1 822 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms