RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 HTR3EA5X5Y0 456 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 AQP12BA6NM10 295 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 FAM90A27PA6NNH2 459 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 GPR171O14626 319 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 GSC2O15499 205 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 VAMP5O95183 116 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 IGF2P01344 180 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 IMPDH2P12268 514 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 RHCEP18577 417 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 FPR1P21462 350 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 ASCL1P50553 236 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 EGR4Q05215 589 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 RASGEF1BQ0VAM2 473 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 TRAM2Q15035 370 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 PDK3Q15120 406 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 FAM98BQ52LJ0 330 aaKnown RBP10.87□□□□□ -0.67
SF3B3-208ENST00000567250 OTUD3Q5T2D3 398 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-208ENST00000567250 PGM2L1Q6PCE3 622 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 PLXDC2Q6UX71 529 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 LINC00114Q6XXX2 140 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 FAM214BQ7L5A3 538 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 AQP12AQ8IXF9 295 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 FAM86B1Q8N7N1 296 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 LILRB4Q8NHJ6 448 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 ABHD3Q8WU67 409 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 TMEM239Q8WW34 195 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 ROBO4Q8WZ75 1007 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 DNAJA3Q96EY1 480 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF300Q96RE9 604 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF347Q96SE7 839 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 PSD2Q9BQI7 771 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF426Q9BUY5 554 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 ASPNQ9BXN1 380 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 CADM1Q9BY67 442 aaKnown RBP10.87□□□□□ -0.67
SF3B3-208ENST00000567250 KRCC1Q9NPI7 259 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-208ENST00000567250 FANCFQ9NPI8 374 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 KCNJ16Q9NPI9 418 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 A4GNTQ9UNA3 340 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 MED31Q9Y3C7 131 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 KLF2Q9Y5W3 355 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-208ENST00000567250 PCNX1Q96RV3 2341 aa10.87□□□□□ -0.67
SF3B3-208ENST00000567250 IGKV1D-42A0A075B6H8 117 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 IGHV3-15A0A0B4J1V0 119 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 AQP7P3A6NL99 342 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 ZNF724A8MTY0 619 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 EEF1E1-BLOC1S5C9J1V9 151 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 hCG_2039718K7EN88 272 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 EEF1E1O43324 174 aaKnown RBP10.86□□□□□ -0.67
SF3B3-208ENST00000567250 FZD7O75084 574 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 SEMG1P04279 462 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 AGTR1P30556 359 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 SLC16A1P53985 500 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 SMIM11AP58511 58 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 SIRPAP78324 504 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 H3F3AP84243 136 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 VLDLRP98155 873 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 CHRNB3Q05901 458 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 MAMDC2Q7Z304 686 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-208ENST00000567250 STK32CQ86UX6 486 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 ZDHHC21Q8IVQ6 265 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 C10orf53Q8N6V4 93 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 SCAIQ8N9R8 606 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 ADPRHL1Q8NDY3 354 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 SLC25A36Q96CQ1 311 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 KTI12Q96EK9 354 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-208ENST00000567250 PTDSS2Q9BVG9 487 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 SF3B5Q9BWJ5 86 aaKnown RBP10.86□□□□□ -0.67
SF3B3-208ENST00000567250 FKRPQ9H9S5 495 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 BCO1Q9HAY6 547 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-208ENST00000567250 FOXD3Q9UJU5 478 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-208ENST00000567250 PROCRQ9UNN8 238 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 POMPQ9Y244 141 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 B3GALT5Q9Y2C3 310 aa10.86□□□□□ -0.67
SF3B3-208ENST00000567250 IGKV3D-15A0A087WSY6 115 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 TCRBV5S2A0A599 114 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 FTCDNL1E5RQL4 147 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 J3KTA2 159 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 KPNA4O00629 521 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 ACOT8O14734 319 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 AKAP8O43823 692 aaKnown RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 CIB2O75838 187 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 TNFSF13O75888 250 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 LYPD3O95274 346 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 MT-ND1P03886 318 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 THY1P04216 161 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 H1F0P07305 194 aaKnown RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 YES1P07947 543 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 RNF224P0DH78 156 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 CD8BP10966 210 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 UMPSP11172 480 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 NQO1P15559 274 aaKnown RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 PEX19P40855 299 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 YAP1P46937 504 aaKnown RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 MS4A2Q01362 244 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 GABPB1Q06547 395 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-208ENST00000567250 FOXF2Q12947 444 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 TMEM225Q6GV28 225 aa10.85□□□□□ -0.67
SF3B3-208ENST00000567250 WDR88Q6ZMY6 472 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms