RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 LRP5LA4QPB2 252 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 TRPC5OSA6NMA1 111 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 ZNF208O43345 1280 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 SHOX2O60902 331 aaPredicted RBP11.09□□□□□ -0.63
RNF40-208ENST00000565995 LINC00032P0C843 101 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 TFPIP10646 304 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 IL2RGP31785 369 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 KHKP50053 298 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 MAP2K6P52564 334 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 DVL1P1P54792 670 aaPredicted RBP11.09□□□□□ -0.63
RNF40-208ENST00000565995 CDH15P55291 814 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 SLC35A1P78382 337 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 RIN1Q13671 783 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 GPR68Q15743 365 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 FAM174BQ3ZCQ3 159 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 BHLHB9Q6PI77 547 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 RIMKLAQ8IXN7 391 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 ZNF786Q8N393 782 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 FAM169BQ8N8A8 192 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 ANKS4BQ8N8V4 417 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 ZIC4Q8N9L1 334 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 OR5D16Q8NGK9 328 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 MIPOL1Q8TD10 442 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 NEU4Q8WWR8 484 aaPredicted RBP11.09□□□□□ -0.63
RNF40-208ENST00000565995 SLC38A2Q96QD8 506 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 VRK1Q99986 396 aaPredicted RBP11.09□□□□□ -0.63
RNF40-208ENST00000565995 NUF2Q9BZD4 464 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 ZNF350Q9GZX5 532 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 RAB1BQ9H0U4 201 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 SERHL2Q9H4I8 314 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 EXOSC3Q9NQT5 275 aaKnown RBP11.09□□□□□ -0.63
RNF40-208ENST00000565995 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 PCDHGB4Q9UN71 923 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 SLC35A3Q9Y2D2 325 aa11.09□□□□□ -0.63
RNF40-208ENST00000565995 TRRAPQ9Y4A5 3859 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 TMEM89A2RUT3 159 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 PIP5K1BO14986 540 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 HDAC3O15379 428 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 VENTXO95231 258 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 C6orf47O95873 294 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 UBTFL6P0CB48 400 aaPredicted RBP11.08□□□□□ -0.64
RNF40-208ENST00000565995 MATN1P21941 496 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 PCMT1P22061 227 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 MAPK1P28482 360 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 HTR3AP46098 478 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 AQP5P55064 265 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 HBA1P69905 142 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 MAPK14Q16539 360 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 GALNTL6Q49A17 601 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 PAQR6Q6TCH4 344 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 CASP12Q6UXS9 341 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 SLC46A3Q7Z3Q1 461 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 POMGNT2Q8NAT1 580 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 NUP37Q8NFH4 326 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 MAGEE2Q8TD90 523 aaPredicted RBP11.08□□□□□ -0.64
RNF40-208ENST00000565995 PMM1Q92871 262 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 DOK1Q99704 481 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 SIKE1Q9BRV8 207 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 NAA11Q9BSU3 229 aaPredicted RBP11.08□□□□□ -0.64
RNF40-208ENST00000565995 SF3B5Q9BWJ5 86 aaKnown RBP11.08□□□□□ -0.64
RNF40-208ENST00000565995 OR11A1Q9GZK7 315 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 POLE3Q9NRF9 147 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 HAO1Q9UJM8 370 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 PRDM4Q9UKN5 801 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 MKLN1Q9UL63 735 aa11.08□□□□□ -0.64
RNF40-208ENST00000565995 ARPC4-TTLL3A0A0A6YYG9 625 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 TMEM129A0AVI4 362 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 CYP7B1O75881 506 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 TGDSO95455 350 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 IGLV1-44P01699 117 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 CRYAAP02489 173 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 OR4A8P0C604 315 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 IMPDH2P12268 514 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 DAOP14920 347 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 DRD4P21917 467 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 SRP14P37108 136 aaKnown RBP11.07□□□□□ -0.64
RNF40-208ENST00000565995 OR2B6P58173 313 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 POU3F1Q03052 451 aaPredicted RBP11.07□□□□□ -0.64
RNF40-208ENST00000565995 PLAURQ03405 335 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 CARTPTQ16568 116 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 SPDYE7PQ495Y7 208 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 XKR7Q5GH72 579 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 C9orf135Q5VTT2 229 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 NXNQ6DKJ4 435 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 TYW3Q6IPR3 259 aaKnown RBP11.07□□□□□ -0.64
RNF40-208ENST00000565995 ANKRD16Q6P6B7 361 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 C6orf120Q7Z4R8 191 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 SPATA21Q7Z572 469 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 OR4F15Q8NGB8 312 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 PPP3R2Q96LZ3 170 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 PRPF18Q99633 342 aaKnown RBP11.07□□□□□ -0.64
RNF40-208ENST00000565995 ELAC2Q9BQ52 826 aaKnown RBP11.07□□□□□ -0.64
RNF40-208ENST00000565995 TMEM120AQ9BXJ8 343 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 ZNF442Q9H7R0 627 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 MOV10Q9HCE1 1003 aaKnown RBP11.07□□□□□ -0.64
RNF40-208ENST00000565995 KLHL14Q9P2G3 628 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 PCDHB14Q9Y5E9 798 aa11.07□□□□□ -0.64
RNF40-208ENST00000565995 TMED7-TICAM2A0A0A6YYA0 188 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 FAAHO00519 579 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms