RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 TMEM99Q8N816 258 aa18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 FAM169BQ8N8A8 192 aa18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 NUP37Q8NFH4 326 aa18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 MAGEE2Q8TD90 523 aaPredicted RBP18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 CNOT9Q92600 299 aaKnown RBP18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 AURKBQ96GD4 344 aaPredicted RBP18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 ZNF442Q9H7R0 627 aa18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 NOP53Q9NZM5 478 aaKnown RBP18.53■□□□□ 0.56
RPUSD1-206ENST00000565503 A0A0A6YYJ9 748 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 ZC3H12DA2A288 527 aaKnown RBP18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 OR6C65A6NJZ3 312 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 LIPT2A6NK58 231 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 AQP7P3A6NL99 342 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 SLCO1B7G3V0H7 640 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 SPRY1O43609 319 aaPredicted RBP18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 SKAP2O75563 359 aaPredicted RBP18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 IGLV1-44P01699 117 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 CECR9P0C854 216 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 CDH15P55291 814 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 SMU1Q2TAY7 513 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 SAXO2Q658L1 398 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 VHLLQ6RSH7 139 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 HMGN2P46Q86SG4 172 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 BCL2L2Q92843 193 aaPredicted RBP18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 APOPT1Q96IL0 206 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 MECRQ9BV79 373 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 ADAM19Q9H013 955 aa18.52■□□□□ 0.56
RPUSD1-206ENST00000565503 VSTM5A8MXK1 200 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 AKR7A3O95154 331 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 LGI1O95970 557 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 UQCRBP14927 111 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 DVL1P1P54792 670 aaPredicted RBP18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 CEACAM7Q14002 265 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 GPAT3Q53EU6 434 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 ZNF786Q8N393 782 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 EPS8L3Q8TE67 593 aaKnown RBP18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 NEURL3Q96EH8 262 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 ZDHHC2Q9UIJ5 367 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 METRNQ9UJH8 293 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 PRDM4Q9UKN5 801 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 MEGF8Q7Z7M0 2845 aa18.51■□□□□ 0.55
RPUSD1-206ENST00000565503 PRSS51A0A1B0GVH4 220 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 PRAMEF27A3QJZ7 478 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 AGAP5A6NIR3 686 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 hCG_2039718K7EN88 272 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 SCN2BO60939 215 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 VAMP5O95183 116 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 HOXB1P14653 301 aaPredicted RBP18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 CALCRP30988 508 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 ARRB2P32121 409 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 RIN1Q13671 783 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 OR7A5Q15622 319 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 ANXA8L1Q5VT79 327 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 DEF8Q6ZN54 512 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 ZCCHC23Q6ZST2 131 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 GPAT4Q86UL3 456 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 VPS37AQ8NEZ2 397 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 UBLCP1Q8WVY7 318 aaPredicted RBP18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 ANKRD27Q96NW4 1050 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 ZIM3Q96PE6 472 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 TRNT1Q96Q11 434 aaKnown RBP18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 SNX18Q96RF0 628 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 DOK1Q99704 481 aa18.5■□□□□ 0.55
RPUSD1-206ENST00000565503 CFAP73A6NFT4 308 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 IGKV3-15P01624 115 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 NPR2P20594 1047 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 SH3BGRP55822 239 aaPredicted RBP18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 EPS8Q12929 822 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 GNA13Q14344 377 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 GSTA3Q16772 222 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 TMEM225Q6GV28 225 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 WDR60Q8WVS4 1066 aa18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 ALKBH3Q96Q83 286 aaPredicted RBP18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 MARCOQ9UEW3 520 aaPredicted RBP18.49■□□□□ 0.55
RPUSD1-206ENST00000565503 HMGN4O00479 90 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 CPSF4O95639 269 aaKnown RBP18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 RPS4Y1P22090 263 aaKnown RBP18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 CXCR1P25024 350 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 CHI3L1P36222 383 aaPredicted RBP18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 SELENOPP49908 381 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 P2RY4P51582 365 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 HGFACQ04756 655 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 CREB3L2Q70SY1 520 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 ANKRD46Q86W74 232 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 GSPT2Q8IYD1 628 aaKnown RBP18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 ZNF440Q8IYI8 595 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 SVOPLQ8N434 492 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 SEMA6DQ8NFY4 1073 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 UBASH3BQ8TF42 649 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 ZMYND19Q96E35 227 aaPredicted RBP18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 TAPBPLQ9BX59 468 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 LINC00470Q9BZP3 86 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 DPY30Q9C005 99 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 SLC38A1Q9H2H9 487 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 SLC17A7Q9P2U7 560 aa18.48■□□□□ 0.55
RPUSD1-206ENST00000565503 B4DSR2 109 aa18.47■□□□□ 0.55
RPUSD1-206ENST00000565503 NR5A2O00482 541 aa18.47■□□□□ 0.55
RPUSD1-206ENST00000565503 VENTXO95231 258 aa18.47■□□□□ 0.55
RPUSD1-206ENST00000565503 IFNGR1P15260 489 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms