RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 RAB39BQ96DA2 213 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 RNFT2Q96EX2 444 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 RCC1LQ96I51 464 aaKnown RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZIC5Q96T25 663 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ATP6V0BQ99437 205 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 CMKLR1Q99788 373 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 HSD17B14Q9BPX1 270 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 PDCD2LQ9BRP1 358 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ARHGAP9Q9BRR9 750 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 RHNO1Q9BSD3 238 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 TMEM121BQ9BXQ6 578 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 RGCCQ9H4X1 137 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 PLEKHA2Q9HB19 425 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 LPAR2Q9HBW0 351 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ADGRL4Q9HBW9 690 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 DNAJC4Q9NNZ3 241 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 FGF20Q9NP95 211 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SLC35D1Q9NTN3 355 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 C2orf42Q9NWW7 574 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF226Q9NYT6 803 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 FOXJ2Q9P0K8 574 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 KLHL8Q9P2G9 620 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 UPB1Q9UBR1 384 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 CACFD1Q9UGQ2 172 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 SIX4Q9UIU6 781 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 DKKL1Q9UK85 242 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 PCDHB8Q9UN66 801 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF330Q9Y3S2 320 aaPredicted RBP5.83□□□□□ -1.48
PTPN9-204ENST00000564970 PRSS21Q9Y6M0 314 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 NRXN3Q9Y4C0 1643 aa5.83□□□□□ -1.48
PTPN9-204ENST00000564970 A0A087WZ62 844 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 A0A087WZY1 265 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 TGIF2-C20orf24A0A0A6YYL0 155 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 FAM95CA0A1B0GW59 222 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 A0A1B0GW64 132 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 C7orf77A4D0Y5 90 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 IFITM10A6NMD0 228 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 B4DEV8 164 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 H3BRB1 525 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 PHOX2AO14813 284 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 EEF1E1O43324 174 aaKnown RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 TCF21O43680 179 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 EDIL3O43854 480 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CDC40O60508 579 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 NDUFB6O95139 128 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 KNG1P01042 644 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 PMP2P02689 132 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CD74P04233 296 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 RLN1P04808 185 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ICAM1P05362 532 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ALPIP09923 528 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ACPPP15309 386 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 HLA-GP17693 338 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ITGB5P18084 799 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ELK1P19419 428 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 BMP5P22003 454 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 DGKAP23743 735 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 SCNN1AP37088 669 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 AVPR1BP47901 424 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 SLC11A1P49279 550 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 DGKEP52429 567 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 F2RL1P55085 397 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 NDUFA6P56556 154 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CLDN8P56748 225 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CLDN18P56856 261 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 RGS8P57771 180 aaPredicted RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CDK5Q00535 292 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 HGFACQ04756 655 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 HERPUD1Q15011 391 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 UGT8Q16880 541 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 KHDC3LQ587J8 217 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CARD16Q5EG05 197 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 HENMT1Q5T8I9 393 aaKnown RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF697Q5TEC3 545 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 PRAMEF20Q5VT98 475 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 GGNBP1Q5YKI7 109 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 NCR3LG1Q68D85 454 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 MRM1Q6IN84 353 aaKnown RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 GDF6Q6KF10 455 aaPredicted RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 APOBEC3HQ6NTF7 200 aaKnown RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ADAM5Q6NVV9 412 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 USP17L2Q6R6M4 530 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 TMEM270Q6UE05 265 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ENPP7Q6UWV6 458 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 TMIGD1Q6UXZ0 262 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 B3GLCTQ6Y288 498 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CBLL1Q75N03 491 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 TMPRSS7Q7RTY8 843 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 TRMT1LQ7Z2T5 733 aaKnown RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 SCN4BQ8IWT1 228 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 TMEM183AQ8IXX5 376 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 ZNF687Q8N1G0 1237 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 LINC00471Q8N535 108 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 SLC38A9Q8NBW4 561 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 INO80EQ8NBZ0 244 aaPredicted RBP5.82□□□□□ -1.48
PTPN9-204ENST00000564970 CHST14Q8NCH0 376 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 LFNGQ8NES3 379 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 OR2AK2Q8NG84 335 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 OR4E2Q8NGC2 313 aa5.82□□□□□ -1.48
PTPN9-204ENST00000564970 OR10G2Q8NGC3 310 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms