RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SLC52A3Q9NQ40 469 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 VAPAQ9P0L0 249 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 SLAMF8Q9P0V8 285 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.29■□□□□ 0.2
CLN6-204ENST00000564752 TRIM33Q9UPN9 1127 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 NOSIPQ9Y314 301 aaKnown RBP16.29■□□□□ 0.2
CLN6-204ENST00000564752 SONP18583 2426 aaKnown RBP16.29■□□□□ 0.2
CLN6-204ENST00000564752 ATRQ13535 2644 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 CRLF1O75462 422 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 IGHV3-9P01782 118 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 CXCR1P25024 350 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 SLC35A1P78382 337 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 WBP2NLQ6ICG8 309 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 UBE2J2Q8N2K1 259 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 CLIP4Q8N3C7 705 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 NFKBIDQ8NI38 313 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 APH1AQ96BI3 265 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 RADILQ96JH8 1075 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 REPIN1Q9BWE0 567 aaKnown RBP16.28■□□□□ 0.2
CLN6-204ENST00000564752 ADAM19Q9H013 955 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 ALG2Q9H553 416 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 FAIMQ9NVQ4 179 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 PRDM4Q9UKN5 801 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 TRAPPC4Q9Y296 219 aa16.28■□□□□ 0.2
CLN6-204ENST00000564752 FBN1P35555 2871 aaKnown RBP16.28■□□□□ 0.2
CLN6-204ENST00000564752 COL6A5A8TX70 2615 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 A0A0G2JND7 137 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 ZC3H12DA2A288 527 aaKnown RBP16.27■□□□□ 0.2
CLN6-204ENST00000564752 GPR171O14626 319 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 ABCD4O14678 606 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 NDUFS7O75251 213 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 ARAFP10398 606 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 ACAA2P42765 397 aaKnown RBP16.27■□□□□ 0.2
CLN6-204ENST00000564752 SLC16A1P53985 500 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 CDH11P55287 796 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 SERPINA11Q86U17 422 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 LSRQ86X29 649 aaPredicted RBP16.27■□□□□ 0.2
CLN6-204ENST00000564752 CCDC103Q8IW40 242 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 LEF1Q9UJU2 399 aaPredicted RBP16.27■□□□□ 0.2
CLN6-204ENST00000564752 GDF2Q9UK05 429 aaPredicted RBP16.27■□□□□ 0.2
CLN6-204ENST00000564752 CHST2Q9Y4C5 530 aa16.27■□□□□ 0.2
CLN6-204ENST00000564752 TRBV5-3A0A0A0MS03 114 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 CIB4A0PJX0 185 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 CCT8L1PA6NM43 557 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 EVPLLA8MZ36 301 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 EIF1BO60739 113 aaKnown RBP16.26■□□□□ 0.19
CLN6-204ENST00000564752 MRPL33O75394 65 aaKnown RBP16.26■□□□□ 0.19
CLN6-204ENST00000564752 RAD51DO75771 328 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 IMPDH2P12268 514 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 PRG2P13727 222 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 ETS2P15036 469 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 H3F3AP84243 136 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 CDK6Q00534 326 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 DMTNQ08495 405 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 TMEM108Q6UXF1 575 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 KRT73Q86Y46 540 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 C10orf111Q8N326 155 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 HS6ST2Q96MM7 605 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 MUS81Q96NY9 551 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 NAA11Q9BSU3 229 aaPredicted RBP16.26■□□□□ 0.19
CLN6-204ENST00000564752 BARX1Q9HBU1 254 aaPredicted RBP16.26■□□□□ 0.19
CLN6-204ENST00000564752 ASB6Q9NWX5 421 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 MGAT4BQ9UQ53 548 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 B3GALT5Q9Y2C3 310 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 SLC25A15Q9Y619 301 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 GMEB1Q9Y692 573 aa16.26■□□□□ 0.19
CLN6-204ENST00000564752 ANGPT2O15123 496 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 FRS3O43559 492 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 GPIP06744 558 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 PTAFRP25105 342 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 AGAP6Q5VW22 663 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 REEP3Q6NUK4 255 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 DHDDSQ86SQ9 333 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 OR52N5Q8NH56 324 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 SLC35B4Q969S0 331 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 CPPED1Q9BRF8 314 aaPredicted RBP16.25■□□□□ 0.19
CLN6-204ENST00000564752 SPATA5L1Q9BVQ7 753 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 IKZF5Q9H5V7 419 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 ZNF385DQ9H6B1 395 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 TAS2R16Q9NYV7 291 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 MALT1Q9UDY8 824 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 ABCA1O95477 2261 aa16.25■□□□□ 0.19
CLN6-204ENST00000564752 A8MVM7 634 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 E7EQL1 145 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 PDLIM1O00151 329 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 GPX2P18283 190 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 PTNP21246 168 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 PRKAR1BP31321 381 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 FOXG1P55316 489 aaPredicted RBP16.24■□□□□ 0.19
CLN6-204ENST00000564752 BNIP2Q12982 314 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 CEACAM7Q14002 265 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 SCARB2Q14108 478 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 OR7A5Q15622 319 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 GABRA6Q16445 453 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 OTUD3Q5T2D3 398 aaPredicted RBP16.24■□□□□ 0.19
CLN6-204ENST00000564752 OR7E24Q6IFN5 339 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 PAQR6Q6TCH4 344 aa16.24■□□□□ 0.19
CLN6-204ENST00000564752 KLHL17Q6TDP4 642 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms